Outline:
- Construction of developmental trajectory network: script.
- Backward Progressive Algorithm: script and a schematic view.
- Quantification of caste developmental potential: script and a schematic view.
- Quantification of canalization score at gene level: script and a schematic view.
- Detection of differentially expressed genes that independent of body size difference: script.
- Threshold regression model (detect the body-size threshold that changes the expression pattern): script.
In house genome annotation for A. echinatior can be found in final_annotation.gff and Aech_GeneInfo.