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Update singlecell and sequence-stimuli example #482

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Update singlecell and sequence-stimuli example

Update singlecell and sequence-stimuli example #482

Workflow file for this run

.github/workflows/test.yml at 0e7c567
name: CI Testing
on:
pull_request:
# allows this workflow to be reusable (e.g. by the build workflow)
workflow_call:
secrets:
CODECOV_TOKEN:
description: The token to upload coverage to codecov
required: true
jobs:
tests:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
pip install tox-gh-actions
- name: Run tox
run: |
tox
- name: Upload to codecov
if: ${{matrix.python-version == '3.11'}}
uses: codecov/codecov-action@v4
with:
token: ${{ secrets.CODECOV_TOKEN }}
fail_ci_if_error: false
lint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up Python 3.11
uses: actions/setup-python@v5
with:
python-version: "3.11"
- name: Install dependencies
run: |
python -m pip install --upgrade pip setuptools
pip install tox-gh-actions
- name: Run tox
run: |
tox -e lint
examples:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up Python 3.11
uses: actions/setup-python@v5
with:
python-version: "3.11"
- name: Install dependencies
run: |
python -m pip install --upgrade pip setuptools
pip install tox-gh-actions
- name: Run tox
run: |
tox -e examples
docs:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up Python 3.11
uses: actions/setup-python@v5
with:
python-version: "3.11"
- name: Install dependencies
run: |
python -m pip install --upgrade pip setuptools
pip install tox-gh-actions
- name: Run tox
run: |
tox -e docs