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GSAT (Genetic Sequence Analysing Tool) is a Java program for analysing AB1 files, comparing them with genes and adding retrieved information about mutations into a database.

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GSAT

Build the final branch for the major stable release (30.3.2017)

Build the master branch for a experimental nighly build

About GSAT

GSAT, which means "Genetic Sequence Analysing Tool", is a Java program for analysing AB1 files, comparing them with genes and adding retrieved information about mutations into a database.

Requirements

Our software requires the Java Runtime Enviroment included in the Java Standard Edition (Java SE). To run our software with a graphical interface the java version must be 1.8 or newer.

Further it is possible, that linux and mac need an additionally installation of "Java FX".

Building/Installation

The newest version of the software can be found under the release tab (v1.0) by downloading the build. This build includes a lib folder and a jar file. An additionally installation is not necessary, start our software by starting the jar.

A smaller console version can be start with the commandline by adding the parameter c.

Users Guide

a short manual to use our software can be found in the software by open the help field or here

License

Everyone is permitted to copy and distribute verbatim copies of this license document, but changing it is not allowed. This version of the GNU Lesser General Public License incorporates the terms and conditions of version 3 of the GNU General Public License, supplemented by the additional permissions, you can find here under LGPL 3.0.

The complete license can you find in the lincense file.

About us

This project is developed by TU Darmstadt students in the context of their so-called "Bachelor-Praktikum" for the Department of Chemistry. The projects ends in march 2017.

The authors are:

  • Kevin Otto
  • Ben Kohr
  • Lovis Heindrich
  • Jannis Blüml

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GSAT (Genetic Sequence Analysing Tool) is a Java program for analysing AB1 files, comparing them with genes and adding retrieved information about mutations into a database.

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