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Error when creating spatial experiment object from IMC segmentation pipeline: 'Could not guess delimiter'. #139

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AnanyaBhalla opened this issue Feb 22, 2024 · 1 comment

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@AnanyaBhalla
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I tried to generate a spatial experiment object 'spe2' as per instructions in 5.1.2: https://bodenmillergroup.github.io/IMCDataAnalysis/read-data.html.

'Error: Could not guess the delimiter.

Use vroom(delim =) to specify one explicitly.'

Has anyone else encountered a similar issue and addressed it successfully?

@Milad4849
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Hi @AnanyaBhalla

Thank you for reaching. I cannot say whether your problem is to do with imcSegmentationPipeline or the ImcDataAnalysis. Could you please check the version of vroom that you have installed, update it in case is ourtdated and try to read the data again?

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