Skip to content

Bohui2447/ProteinComplex1

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

60 Commits
 
 
 
 

Repository files navigation

ProteinComplex1

This work was conducted under R version 3.5.1
First download the data from "Link" and save them in the current working directory

Install functions used in this project

devtools::install_github("paodan/funcTools")
library(funcTools)

#Install keras package # keras version 2.2.5.0
install.packages("keras")
or
devtools::install_github("rstudio/keras")
library(keras)

Download dataset for model training

https://uu.figshare.com/articles/dataset/Dataset_for_protein_complexes_project/22043474 This website contains three datasets (training dataset, testing dataset, and validation dataset) and a deep learning model (the best model used in the manuscirpt to predict the protein-protein interaction).

Then download and open the 30_00_model_training_evaluation.R in Rscript and run the code for reproducing

About

No description, website, or topics provided.

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages