r3dmol

This is an R package that provides support for 3Dmol.js as a htmlwidgets.

Installation

Important: This package is still very early in its development stages. Please give the repository a star on Github if you find the package is useful. In addition, we need your feedback to improve the package, feel free to create an issue if you have any question or feature requirement. You are more than welcome to submit a PR to make any feasible improvements.

You could install the released version of r3dmol from CRAN with:

install.packages("r3dmol")

And the development version from GitHub with:

# install.packages("devtools")
devtools::install_github("swsoyee/r3dmol")

Example

library(r3dmol)
r3dmol() %>%
  m_add_model(data = pdb_6zsl, format = "pdb") %>%
  m_zoom_to() %>%
  m_set_style(style = m_style_cartoon(color = 'spectrum'))

About 3Dmol.js

Nicholas Rego, David Koes, 3Dmol.js: molecular visualization with WebGL, Bioinformatics, Volume 31, Issue 8, 15 April 2015, Pages 1322–1324,