Skip to content

Issues: CAST-genomics/haptools

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

11 Open 43 Closed
11 Open 43 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

parallelize reading from a PGEN file
#253 opened Jun 20, 2024 by aryarm
snplist support in the ld command
#245 opened Jun 5, 2024 by aryarm
feat: a dosage command for storing TR motif counts in PGEN files enhancement New feature or request
#221 opened Sep 15, 2023 by aryarm
2 tasks
increase our testing coverage
#205 opened Apr 8, 2023 by aryarm
support for bgzipped and tabix-indexed map files enhancement New feature or request
#120 opened Oct 13, 2022 by aryarm
1
github actions and publishing releases enhancement New feature or request
#117 opened Oct 3, 2022 by aryarm
14 of 15 tasks
@aryarm
1
speeding up the transform command enhancement New feature or request help wanted Extra attention is needed idea
#92 opened Sep 1, 2022 by aryarm
6
feat: a validate subcommand to check whether a .hap file is valid enhancement New feature or request
#47 opened Jun 10, 2022 by aryarm
28 of 33 tasks
1
3
allow writing Haplotype objects one by one instead of all at once enhancement New feature or request
#44 opened Apr 22, 2022 by aryarm
improvements to the Data module enhancement New feature or request
#19 opened Mar 20, 2022 by aryarm
16 of 17 tasks
@aryarm
2
add interaction terms enhancement New feature or request
#4 opened Jul 26, 2021 by aryarm
1
ProTip! Mix and match filters to narrow down what you’re looking for.