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Pull requests: CCMS-UCSD/GNPS_Workflows

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Pull requests list

Brings FBMN support for SIRIUS lcms processing
#869 opened Jan 30, 2024 by lfnothias Loading…
1
Update to FBMN MSDIAL/Progenesis/Metaboscape converter
#868 opened Jan 30, 2024 by lfnothias Loading…
Bump certifi from 2020.12.5 to 2022.12.7 dependencies Pull requests that update a dependency file
#857 opened Dec 8, 2022 by dependabot bot Loading…
Bump pillow from 8.1.0 to 9.3.0 dependencies Pull requests that update a dependency file
#856 opened Nov 22, 2022 by dependabot bot Loading…
Bump joblib from 1.0.1 to 1.2.0 dependencies Pull requests that update a dependency file
#852 opened Sep 30, 2022 by dependabot bot Loading…
Bump lxml from 4.6.2 to 4.9.1 dependencies Pull requests that update a dependency file
#846 opened Jul 6, 2022 by dependabot bot Loading…
[Workflow] Adding RT modeling and Filtering workflow
#845 opened Jul 5, 2022 by mwang87 • Draft
Bump numpy from 1.20.1 to 1.22.0 dependencies Pull requests that update a dependency file
#844 opened Jun 22, 2022 by dependabot bot Loading…
[GC] Merging/Clustering of GC spectra that are redundant
#820 opened Mar 1, 2022 by mwang87 • Draft
[FBMN] Adding Agilent Support for Single Files
#808 opened Jan 21, 2022 by mwang87 • Draft
Update msdial_formatter.py
#804 opened Jan 4, 2022 by chrispook Loading…
7
[Spec2Vec] Reset Component Index based on new network topology
#785 opened Oct 6, 2021 by KyobinKang Loading…
2
[Networking] Adding user defined parameter for the level of parallelism we could allow
#741 opened Jun 29, 2021 by mwang87 • Draft
@mwang87
Bump urllib3 from 1.26.3 to 1.26.5 dependencies Pull requests that update a dependency file
#734 opened Jun 2, 2021 by dependabot bot Loading…
[Classic Networking] Adding linkouts for MASST+
#732 opened May 21, 2021 by mwang87 • Draft
[Library Search] Adding error handling
#730 opened May 14, 2021 by mwang87 • Draft
[Classic Networking] Adding new binary for listing out peak matches and min ratio
#729 opened May 12, 2021 by mwang87 • Draft
Convert carbon markers RT in minutes to match library spectral library
#727 opened May 11, 2021 by lfnothias Loading…
[FBMN] Adding support for SIRIUS processing. Updating Optimus and MetaboScape converters
#715 opened Apr 9, 2021 by mwang87 • Draft
[FBMN] Filtering MGF based on quant file
#695 opened Mar 4, 2021 by mwang87 • Draft
[XIC Batch] First Version of XIC Batch Workflow
#680 opened Feb 8, 2021 by mwang87 Loading…
[FBMN] Adding linkout to DEREPLICATOR PLUS and CYCLONOVO
#673 opened Jan 28, 2021 by lfnothias Loading…
1
MASST XIC
#572 opened Jul 6, 2020 by mwang87 • Draft
Constraint MASST
#513 opened Apr 29, 2020 by mwang87 • Draft
1
explicity adding min ratio parameter
#485 opened Apr 10, 2020 by mwang87 • Draft
ProTip! What’s not been updated in a month: updated:<2024-06-06.