Title of Dataset

Python code for Deconstructing the effects of stochasticity on transmission of hospital-acquired infections in ICUs

Description of the data and file structure

The results of the simulations can be found in the "output" folder. Input files, including parameters and sampling distributions for MC can be found in the "data" folder.

Code/Software

Run "monte_carlo_simulation.py" for simulations. Run "pcorr.py" for uncertainty analysis after running simulations.

Name		Name	Last commit message	Last commit date
Latest commit History 12 Commits
__pycache__		__pycache__
data		data
output		output
select_burnIn		select_burnIn
select_simLen		select_simLen
README.md		README.md
agents.py		agents.py
convex_hull_from_logit_test.py		convex_hull_from_logit_test.py
draw_seasonality_effect.py		draw_seasonality_effect.py
main.py		main.py
mode-decomposition.py		mode-decomposition.py
monte_carlo_simulation.py		monte_carlo_simulation.py
plot_avg_vs_single.py		plot_avg_vs_single.py
post_processing.py		post_processing.py
seasonality_effects_different_measures.py		seasonality_effects_different_measures.py
smoothing_function.py		smoothing_function.py
summary_stats_MC.py		summary_stats_MC.py

CDDEP-DC/ABMSeasonality

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Description of the data and file structure

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