SHIFTS v0.3.1

RECOMfilterer

• New corr_xcorr parameter to calculate corrected xcorr.
• Decoy prefixes can now be any length.
• Add RECOMfiltered MH and sequence to output.

PeakAssignator

• New recom_mod_peptide_column parameter (Name of column containing Recom sequence with deltamass in XXX[DM]XXX or XXXXXX_DM format).
• Assigned sequence now takes into account Recom mod. position if applicable.

PeakFDRer

• Separating PeakFDRer output according to the batch table is now optional.
• experiment_table command line option is now called batch.
• New BatchSeparator module.