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API Plot labels for XSData object; Other cleanups #402

Merged
merged 12 commits into from May 12, 2020
Merged

API Plot labels for XSData object; Other cleanups #402

merged 12 commits into from May 12, 2020

Commits on May 4, 2020

  1. API Add dictionary-like access to XSPlotReader 

    Provides len, contains, getitem, get, keys, values, items

Add dedicated pytest test file for the xsplot reader
    @drewejohnson
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  2. STY Clean up some lint in tests/__init__.py

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  3. DOC Clean up XSData docstrings

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  4. API Provide XSData __getitem__, get methods 

    Index into the cross section data given a reaction
MT that exists in MT list. Emulates dictionary-like access,
but relies on finding the index from self.MT
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  5. Provide XSData.describe for explaining MTs 

    Given a reaction MT, return it's corresponding description.
Works for positive or negative
    @drewejohnson
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  6. API XSData.plot supports labels argument 

    The following modes are available:

1. None -> get descriptions from self.describe
2. str -> only if a single MT is plotted
3. mapping {mt: label} -> Provide a label for one or all MTs plotted.
   Does not have to contain all the reactions. Missing MTs will
   fall back to their description
4. Iterable -> Must have length equal to MTs being plotted. Provide
   labels in the order of iteration
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  7. API Provide XSData.energies; prefer over metadata

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  8. API Provide XSPlotReader.{energies,majorant}; prefer over metadata

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  9. DEV Strip leading whitespace from XSData MTs

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    drewejohnson committed May 4, 2020
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  10. DOC Update XSPlot notebook, example 

    Remove some unused PNGs as well
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  11. API Provide a length for XSPlotReader

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  12. TST Add pytest specific XSPlot tester 

    Tests dictionary access, plot labeling, and describe method
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