somewhat safer synch (issue COSIMA/access-om2#59)

COSIMA · Dec 5, 2017 · 598c8bc · 598c8bc
1 parent d5b4aed
commit 598c8bc
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Showing 2 changed files with 5 additions and 4 deletions.
diff --git a/sync_output_to_gdata.sh b/sync_output_to_gdata.sh
@@ -7,9 +7,10 @@
 #PBS -N sync_output_to_gdata
 
 # Set this directory to something in /g/data3/hh5/tmp/cosima/
-# (make a unique path for your set of runs)
+# Make a unique path for your set of runs.
+# DOUBLE-CHECK IT IS UNIQUE SO YOU DON'T OVERWRITE EXISTING OUTPUT!
 GDATADIR=/ERROR/SET/GDATADIR/IN/sync_output_to_gdata.sh
 
 mkdir -p ${GDATADIR}
 cd archive
-rsync --exclude "*.nc.*" -av --safe-links --no-g output* ${GDATADIR}
+rsync --ignore-existing --exclude "*.nc.*" -av --safe-links --no-g output* ${GDATADIR}
diff --git a/sync_restarts_to_gdata.sh b/sync_restarts_to_gdata.sh
@@ -8,5 +8,5 @@
 
 source sync_output_to_gdata.sh # to define GDATADIR and cd archive
 
-# rsync -av --safe-links --no-g restart??[05]* ${GDATADIR}
-rsync -av --safe-links --no-g restart* ${GDATADIR}
+# rsync --ignore-existing -av --safe-links --no-g restart??[05]* ${GDATADIR}
+rsync --ignore-existing -av --safe-links --no-g restart* ${GDATADIR}