Skip to content
@CRI-iAtlas

CRI iAtlas

Popular repositories Loading

  1. shiny-iatlas shiny-iatlas Public

    An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app

    R 48 12

  2. ImmuneSubtypeClassifier ImmuneSubtypeClassifier Public

    An R package for classification of immune subtypes, in cancer, using gene expression data.

    R 43 23

  3. iatlas-app iatlas-app Public

    R Shiny app for CRI iAtlas, an interactive web portal for exploring immuno-oncology data. (iAtlas portal 2022 and beyond)

    R 12 3

  4. iatlas-workflows iatlas-workflows Public

    cwl workflows for public tools

    Common Workflow Language 2 4

  5. iatlas-notebooks iatlas-notebooks Public

    Collection of R notebooks to enable local iAtlas plotting and functionality.

    Jupyter Notebook 2

  6. shiny-heatmap-viewer shiny-heatmap-viewer Public

    R 1

Repositories

Showing 10 of 28 repositories
  • CRI-iAtlas/iatlasManifests’s past year of commit activity
    R 0 0 1 0 Updated Dec 6, 2024
  • iatlas-app Public

    R Shiny app for CRI iAtlas, an interactive web portal for exploring immuno-oncology data. (iAtlas portal 2022 and beyond)

    CRI-iAtlas/iatlas-app’s past year of commit activity
    R 12 3 27 0 Updated Dec 2, 2024
  • ImmuneSubtypeClassifier Public

    An R package for classification of immune subtypes, in cancer, using gene expression data.

    CRI-iAtlas/ImmuneSubtypeClassifier’s past year of commit activity
    R 43 23 10 0 Updated Nov 7, 2024
  • iAtlasSchema Public

    The data model schema for the iAtlas database

    CRI-iAtlas/iAtlasSchema’s past year of commit activity
    0 0 1 0 Updated Oct 8, 2024
  • CRI-iAtlas/iatlas.modules2’s past year of commit activity
    R 0 1 0 0 Updated Sep 25, 2024
  • iatlas-notebooks Public

    Collection of R notebooks to enable local iAtlas plotting and functionality.

    CRI-iAtlas/iatlas-notebooks’s past year of commit activity
    Jupyter Notebook 2 0 1 0 Updated Sep 24, 2024
  • CRI-iAtlas/iatlasGraphQLClient’s past year of commit activity
    R 0 1 3 0 Updated Aug 9, 2024
  • CRI-iAtlas/iatlas.modules’s past year of commit activity
    R 0 1 0 0 Updated Aug 5, 2024
  • scRNAseq-dev Public

    Code to prepare single-cell RNA-seq datasets for ingress in iAtlas

    CRI-iAtlas/scRNAseq-dev’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 28, 2024
  • nf-pseudobulk Public

    Nextflow pipeline to compute GSEA for pseudobulk scRNAseq

    CRI-iAtlas/nf-pseudobulk’s past year of commit activity
    Nextflow 0 0 0 0 Updated Apr 17, 2024

Top languages

Loading…

Most used topics

Loading…