Skip to content

A generic PK/PD simulation platform based on rxode2 and mrgsolve engines.

License

Notifications You must be signed in to change notification settings

Calvagone/campsis

Repository files navigation

campsis

R-CMD-check codecov CRAN version CRAN total downloads CRAN total downloads

Requirements

  • R package campsismod must be installed beforehand
  • Simulation engine must be installed too (rxode2, RxODE or mrgsolve)

Installation

Install the latest stable release using devtools:

devtools::install_github("Calvagone/campsis")

Basic example

Import the campsis package:

library(campsis)

Create your dataset:

ds <- Dataset(50) %>%
  add(Bolus(time=0, amount=1000, ii=12, addl=2)) %>%
  add(Observations(times=seq(0, 36, by=0.5)))

Load your own model or use a built-in model from the library:

model <- model_suite$pk$`2cpt_fo`

Simulate your results with your preferred simulation engine (rxode2, RxODE or mrgsolve at your choice!):

results <- model %>% simulate(dataset=ds, dest="rxode2", seed=1)

Plot your results:

shadedPlot(results, "CONC")

About

A generic PK/PD simulation platform based on rxode2 and mrgsolve engines.

Resources

License

Stars

Watchers

Forks

Packages

No packages published

Languages