lets try adding this module file - I'll need to do a lot of cleanup, …

…later
CamDavidsonPilon · May 23, 2016 · 1fa4b38 · 1fa4b38
1 parent 75bd954
commit 1fa4b38
Show file tree

Hide file tree

Showing 7 changed files with 173 additions and 1 deletion.
diff --git a/docs/conf.py b/docs/conf.py
@@ -33,6 +33,7 @@
     'sphinx.ext.coverage',
     'sphinx.ext.pngmath',
     'sphinx.ext.mathjax',
+    'sphinx.ext.autodoc',
 ]
 
 # Add any paths that contain templates here, relative to this directory.

diff --git a/docs/index.rst b/docs/index.rst
@@ -31,7 +31,6 @@ Contents:
   Quickstart
   Survival Analysis intro
   Intro to lifelines
-  Univarite Survival Models
   Survival Regression
   Examples
 

diff --git a/docs/lifelines.datasets.rst b/docs/lifelines.datasets.rst
@@ -0,0 +1,10 @@
+lifelines.datasets package
+==========================
+
+Module contents
+---------------
+
+.. automodule:: lifelines.datasets
+    :members:
+    :undoc-members:
+    :show-inheritance:
diff --git a/docs/lifelines.fitters.rst b/docs/lifelines.fitters.rst
@@ -0,0 +1,70 @@
+lifelines.fitters package
+=========================
+
+Submodules
+----------
+
+lifelines.fitters.aalen_additive_fitter module
+----------------------------------------------
+
+.. automodule:: lifelines.fitters.aalen_additive_fitter
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+lifelines.fitters.breslow_fleming_harrington_fitter module
+----------------------------------------------------------
+
+.. automodule:: lifelines.fitters.breslow_fleming_harrington_fitter
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+lifelines.fitters.coxph_fitter module
+-------------------------------------
+
+.. automodule:: lifelines.fitters.coxph_fitter
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+lifelines.fitters.exponential_fitter module
+-------------------------------------------
+
+.. automodule:: lifelines.fitters.exponential_fitter
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+lifelines.fitters.kaplan_meier_fitter module
+--------------------------------------------
+
+.. automodule:: lifelines.fitters.kaplan_meier_fitter
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+lifelines.fitters.nelson_aalen_fitter module
+--------------------------------------------
+
+.. automodule:: lifelines.fitters.nelson_aalen_fitter
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+lifelines.fitters.weibull_fitter module
+---------------------------------------
+
+.. automodule:: lifelines.fitters.weibull_fitter
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+
+Module contents
+---------------
+
+.. automodule:: lifelines.fitters
+    :members:
+    :undoc-members:
+    :show-inheritance:
diff --git a/docs/lifelines.rst b/docs/lifelines.rst
@@ -0,0 +1,63 @@
+lifelines package
+=================
+
+Subpackages
+-----------
+
+.. toctree::
+
+    lifelines.datasets
+    lifelines.fitters
+    lifelines.utils
+
+Submodules
+----------
+
+lifelines.estimation module
+---------------------------
+
+.. automodule:: lifelines.estimation
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+lifelines.generate_datasets module
+----------------------------------
+
+.. automodule:: lifelines.generate_datasets
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+lifelines.plotting module
+-------------------------
+
+.. automodule:: lifelines.plotting
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+lifelines.statistics module
+---------------------------
+
+.. automodule:: lifelines.statistics
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+lifelines.version module
+------------------------
+
+.. automodule:: lifelines.version
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+
+Module contents
+---------------
+
+.. automodule:: lifelines
+    :members:
+    :undoc-members:
+    :show-inheritance:
diff --git a/docs/lifelines.utils.rst b/docs/lifelines.utils.rst
@@ -0,0 +1,22 @@
+lifelines.utils package
+=======================
+
+Submodules
+----------
+
+lifelines.utils.progress_bar module
+-----------------------------------
+
+.. automodule:: lifelines.utils.progress_bar
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+
+Module contents
+---------------
+
+.. automodule:: lifelines.utils
+    :members:
+    :undoc-members:
+    :show-inheritance:
diff --git a/docs/modules.rst b/docs/modules.rst
@@ -0,0 +1,7 @@
+lifelines
+=========
+
+.. toctree::
+   :maxdepth: 4
+
+   lifelines