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Error: 'temp_o' is not defined #6

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rahulk87 opened this issue Mar 22, 2021 · 2 comments
Open

Error: 'temp_o' is not defined #6

rahulk87 opened this issue Mar 22, 2021 · 2 comments

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@rahulk87
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Hi,
I am using this tool and getting the following error:

NameError: name 'temp_o' is not defined

Code is working fine on example dataset provided with software but not on our dataset. Any clue why it is not working would be very helpful.

Thanks!!
@katieyost
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Can you send the command you used? Thanks!

@huipan1973
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Same issue

The comand I ran:
python /home/panh/ATACPrimerTool/pipelines/ATACPrimerTool.py -O APT_res -S KCTD17_promoter -G hg38 -I noorg_bam -B SRR7585374_KCTD17_promoter_peak.bed -fasta /n/jobspace/bbcore/ucsc_genome/hg38/hg38.fa -cor 0.8

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@huipan1973 @rahulk87 @katieyost