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Microbiome study in bare-nosed wombats with 16S and ITS2 amplicon gene marker sequencing.

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ChrisNaes/2021_BNW_skin_microbiome

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2021_BNW_skin_microbiome

Title: Sarcoptic mange changes bacterial and fungal microbiota of bare-nosed wombats (Vombatus ursinus)

Link to paper: https://parasitesandvectors.biomedcentral.com/articles/10.1186/s13071-022-05452-y

Raw files available on NCBI: https://www.ncbi.nlm.nih.gov/sra/PRJNA928471

Skin microbiome study in bare-nosed wombats affected by sarcoptic mange, using 16Sv4 and ITS2 amplicon gene marker sequencing. Github repository consists of Jupyter notebook for each amplicon gene marker, QIIME2 output files, and R codes for statistics and visualisation.

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Microbiome study in bare-nosed wombats with 16S and ITS2 amplicon gene marker sequencing.

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