fixing chimeric junction filename

Clinical-Genomics · Mar 4, 2022 · 4e59123 · 4e59123
1 parent ba96f11
commit 4e59123
Showing 1 changed file with 1 addition and 2 deletions.
diff --git a/lib/MIP/Recipes/Analysis/Star_aln.pm b/lib/MIP/Recipes/Analysis/Star_aln.pm
@@ -904,7 +904,6 @@ sub analysis_star_fusion_aln {
             }
         )
     );
-    my $outdir_path         = $io{out}{dir_path};
     my $outfile_name        = ${ $io{out}{file_names} }[0];
     my $outfile_path        = $io{out}{file_path};
     my $outfile_path_prefix = $io{out}{file_path_prefix};
@@ -1048,7 +1047,7 @@ sub analysis_star_fusion_aln {
     gnu_mv(
         {
             filehandle   => $filehandle,
-            infile_path  => catfile( $outdir_path, q{Chimeric.out.junction} ),
+            infile_path  => $outfile_path_prefix . $DOT . q{Chimeric.out.junction},
             outfile_path => $outfile_path,
         }
     );