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82 Open 194 Closed
82 Open 194 Closed
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Issues list

New EPP to adjust the sequencing reads for samples in Define Run Format and Calculate Volumes (NovaSeq X) Gain: Large Urgency: Medium
#514 opened Jul 17, 2024 by idalindegaard
@idalindegaard
1
Ensure UDF "Missing Reads pool (M)" updates for a single sample in 'sum_missing_reads_in_pool' script
#513 opened Jul 15, 2024 by idalindegaard
@idalindegaard
Automate inventory calculations by retrieving number of samples processed in relevant LIMS steps
#510 opened May 29, 2024 by idalindegaard
Merge Copy Concentration (nM) EPPs in step Define Run Format and Calculate Volumes (NovaSeq X)
#509 opened May 28, 2024 by idalindegaard
@idalindegaard
1
Verify that the sample UDF Passed Initial QC is set in all reception control steps
#508 opened May 28, 2024 by Karl-Svard
@Karl-Svard @idalindegaard
The available volume for ONT sequencing reloads doesn't work with re-preps
#504 opened May 23, 2024 by Karl-Svard
Improve sequencing planning and pooling, prio 1 project
#498 opened May 2, 2024 by EmiliaRegazzoni
@Karl-Svard @idalindegaard @EmiliaRegazzoni
2
Automation of Rsquare values from Quantit file to LIMS
#497 opened Apr 26, 2024 by idalindegaard
32 tasks
@idalindegaard
Pre-set for Quant-it set up on Hamilton
#496 opened Apr 26, 2024 by idalindegaard
@idalindegaard
Add a duplicate barcode warning in the lims RC steps enhancement New feature or request Urgency: Medium
#476 opened Mar 5, 2024 by FayKanellidou
@Karl-Svard @idalindegaard
3
WGS RC: Request for a new feature in LIMS to avoid plate contaminations in Hamilton
#471 opened Jan 29, 2024 by ceciliamattssonscilifelab
@Karl-Svard @idalindegaard
Change lims for lack of speedvaccing in RC tga
#466 opened Jan 12, 2024 by EmiliaRegazzoni
@Karl-Svard @idalindegaard
1
Improve TGA pooling in LIMS
#456 opened Nov 28, 2023 by idalindegaard
5
Add instrument in TGA Aliquotation step
#454 opened Nov 21, 2023 by saschaconradt
@Karl-Svard @idalindegaard
1
Add "Sequencing analysis" udf to 96 well placement map in step CG002 - Normalization of microbial samples for sequencing
#448 opened Nov 8, 2023 by idalindegaard
@Karl-Svard @idalindegaard
1
New workflow in LIMS: Saphyr Effort: Medium
#442 opened Oct 24, 2023 by idalindegaard
4 of 5 tasks
@Karl-Svard @idalindegaard
4
Move Arnold information from the README into Atlas
#441 opened Oct 17, 2023 by Karl-Svard
Update to Lims 6.2
#440 opened Oct 17, 2023 by amandaraud
2 of 4 tasks
@Karl-Svard @idalindegaard
EPP Queue Samples for sequencing (with variations) moves samples regardless of QC flags and choice to leave samples in QC protocol
#439 opened Oct 6, 2023 by idalindegaard
@Karl-Svard @idalindegaard
1
Refine the way samples are sent to top-up and the Define Run Format step
#438 opened Sep 22, 2023 by Karl-Svard
1
LIMS verification - [Normalize RNA finished libraries on Hamilton and make dilutions in LIMS] enhancement New feature or request Urgency: Small Verification issue
#437 opened Sep 22, 2023 by idalindegaard
8 tasks
@annaengstrom @Karl-Svard
1
Add warning in RC Aliquotation steps for aliquotation volumes < 1ul Gain: Medium
#435 opened Sep 12, 2023 by FayKanellidou
@Karl-Svard @idalindegaard
Add information in LIMS how many PCR cycles has been used in the TGA workflow
#431 opened Aug 23, 2023 by annaengstrom
@VasKyriak @Karl-Svard
@idalindegaard @EmiliaRegazzoni
3
Arnold updates for the new NovaSeq X workflows NovaSeq X
#426 opened Aug 18, 2023 by Karl-Svard
Transfer and update check_indexes_before_aliquot.py
#396 opened Jul 18, 2023 by Karl-Svard
ProTip! What’s not been updated in a month: updated:<2024-07-07.