Release 4.5 (#220)

* prepare release 4.5

* revert setup and include DEPLOYMENT.md

CHANGELOG.md

@@ -2,13 +2,16 @@
 All notable changes to this project will be documented in this file.
 This project adheres to [Semantic Versioning](http://semver.org/).
 
-## [4.4.0] - 2020-02-12
-
+## [4.5.0] - 2020-11-12
 ### Added
-- User can pass on file with row separated gene IDs for coverage calculation
 - Dockerfile
 - Added the Docker image build and push triggered by new releases
-- Added githib action running pytest and coveralls
+- Added github action running pytest and coveralls
+- Software deployment instructions
+
+## [4.4.0] - 2020-02-12
+### Added
+- User can pass on file with row separated gene IDs for coverage calculation
 
 ## [4.3.0] - 2020-02-05
 

DEPLOYMENT.md

@@ -0,0 +1,34 @@
+# Deployment guide
+This includes instructions for deploying Chanjo in the Clinical Genomics :hospital: setting. General instructions for deployment is in the [development guide][development-guide]
+
+## Branch model
+
+Chanjo if following the [GitHub flow][gh-flow] branching model which means that every time a PR is merged to master a new release is created.
+
+## Requirements
+
+- `bumpversion`, install with `pip install bumpversion`
+
+## Steps
+
+1. Check in the PR if the change is a minor, mayor or patch: ![Version][pr-version]
+1. Make sure you are on `master` (`git checkout master`) and bump version according to step 1, example: `bumpversion minor`
+1. Push the commit: `git push`
+1. Push the tag: `git push --tags`
+1. First deploy on stage so log into hasta and run:
+    - `us`
+    - `bash /home/proj/production/servers/resources/hasta.scilifelab.se/update-chanjo-stage.sh master`
+1. Deploy in productions by running the following commands:
+    - `down`
+    - `up`
+    - `bash /home/proj/production/servers/resources/hasta.scilifelab.se/update-chanjo-prod.sh`
+1. Take a screen shot that includes the name of the environment and publish it as a comment on the PR.
+1. Great job :whale2:
+
+
+
+
+
+[pr-version]: docs/img/version.png
+[development-guide]: http://www.clinicalgenomics.se/development/publish/prod/
+[gh-flow]: http://www.clinicalgenomics.se/development/dev/models/#rolling-release-github-flow