Move remove badge to status column, and add a debug flash

Clinical-Genomics · Jul 3, 2024 · 9046707 · 9046707
1 parent a42c89e
commit 9046707
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Showing 2 changed files with 9 additions and 5 deletions.
diff --git a/scout/server/blueprints/cases/controllers.py b/scout/server/blueprints/cases/controllers.py
@@ -510,7 +510,11 @@ def _get_default_panel_genes(store: MongoAdapter, case_obj: dict) -> list:
             projection=PANEL_PROJECTION,
         )
         latest_panel = store.gene_panel(panel_name, projection=PANEL_PROJECTION)
-        panel_info["removed"] = False if latest_panel is None else latest_panel.get("hidden", False)
+        panel_info["removed"] = (
+            latest_panel.get("hidden", False) if latest_panel is not None else False
+        )
+        if panel_info["removed"]:
+            flash(f"Setting panel removed for panel '{panel_name}'.")
         if not panel_obj:
             panel_obj = latest_panel
             if not panel_obj:

diff --git a/scout/server/blueprints/cases/templates/cases/gene_panel.html b/scout/server/blueprints/cases/templates/cases/gene_panel.html
@@ -9,7 +9,7 @@
         <thead class="table-light thead">
           <tr style="cursor: pointer; white-space: nowrap">
             <th>Panel <i class="fas fa-sort" data-bs-toggle="tooltip" title="Sort by gene panel name"></i></th>
-            <th >Default <i class="fas fa-sort" data-bs-toggle="tooltip" title="Sort by default panel"></i></th>
+            <th>Status <i class="fas fa-sort" data-bs-toggle="tooltip" title="Sort by panel status"></i></th>
             <th>Version <i class="fas fa-sort" data-bs-toggle="tooltip" title="Sort by panel version"></i></th>
             <th>Genes <i class="fas fa-sort" data-bs-toggle="tooltip" title="Sort by number of genes"></i></th>
           </tr>
@@ -20,15 +20,15 @@
               <td>
                 <a {% if panel.is_default %} class="text-white" {% endif %} href="{{ url_for('panels.panel', panel_id=panel.panel_id, case_id=case._id, institute_id=institute._id) }}">
                   {{ panel.display_name|truncate(30, True) }}
-                  {% if panel.removed %}
-                    <span class="badge bg-danger">Removed</span>
-                  {% endif %}
                 </a>
               </td>
               <td >
                 {% if panel.is_default %}
                   <span class="badge bg-dark">Default</span>
                 {% endif %}
+                {% if panel.removed %}
+                  <span class="badge bg-danger">Removed</span>
+                {% endif %}
               </td>
               <td>{{ panel.version }} <small class="text">({{ panel.updated_at.date() }})</small></td>
               <td>{{ panel.nr_genes }}</td>