Merge 66e431d into 2e0036f

Clinical-Genomics · Mar 8, 2019 · acf5050 · acf5050
2 parents 2e0036f + 66e431d
commit acf5050
Show file tree

Hide file tree

Showing 2 changed files with 5 additions and 3 deletions.
diff --git a/scout/server/blueprints/cases/controllers.py b/scout/server/blueprints/cases/controllers.py
@@ -447,12 +447,14 @@ def gene_variants(store, variants_query, page=1, per_page=50):
     variants = []
     for variant_obj in variant_res:
         # hide other institutes for now
-        if (variant_obj['institute'] not in my_institutes):
+        if variant_obj['institute'] not in my_institutes:
             log.debug("Institute {} not allowed.".format(variant_obj['institute']))
             continue
 
         variant_case_obj = store.case(case_id=variant_obj['case_id'])
-        case_display_name = variant_case_obj['display_name']
+        if not variant_case_obj:
+            continue
+        case_display_name = variant_case_obj.get('display_name')
         variant_obj['case_display_name'] = case_display_name
 
         gene_ids = []

diff --git a/scout/server/blueprints/cases/templates/cases/gene_variants.html b/scout/server/blueprints/cases/templates/cases/gene_variants.html
@@ -102,7 +102,7 @@ <h4 class="panel-title">
 
 {% macro cell_rank(variant) %}
 <a class="variants-row-item flex-small layout"
-   href="{{ url_for('variants.variant', institute_id=institute._id,
+   href="{{ url_for('variants.variant', institute_id=variant.institute,
         case_name=variant.case_display_name, variant_id=variant._id) }}">
   {{ variant.case_display_name}} : {{ variant.rank_score|int }}
 </a>