ci: make sure coverage runs on branch

Signed-off-by: Ali Sajid Imami <395482+AliSajid@users.noreply.github.com>

.Rbuildignore

@@ -12,6 +12,7 @@
 ^\.pre-commit-config.yaml$
 ^\.travis\.yml$
 ^\.vscode$
+^codecov\.yml$
 ^codemeta\.json$
 ^data-raw$
 ^doc$

.github/workflows/test-coverage.yaml

@@ -2,9 +2,9 @@
 # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
 on:
   push:
-    branches: [main, master]
+    branches: [main, master, devel]
   pull_request:
-    branches: [main, master]
+    branches: [main, master, devel]
 
 name: test-coverage
 

README.Rmd

@@ -19,11 +19,10 @@ knitr::opts_chunk$set( # nolint: extraction_operator_linter.
 [![Lifecycle: experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)
 
 [![Continuous Integration / R Workflows](https://github.com/CogDisResLab/drugfindR/actions/workflows/rworkflows.yml/badge.svg)](https://github.com/CogDisResLab/drugfindR/actions/workflows/rworkflows.yml)
-[![codecov](https://codecov.io/gh/CogDisResLab/drugfindR/branch/main/graph/badge.svg?token=FeAvIeTAiz)](https://codecov.io/gh/CogDisResLab/drugfindR)
-[![latest-version](https://img.shields.io/badge/dynamic/json?url=https%3A%2F%2Fcogdisreslab.r-universe.dev%2Fapi%2Fpackages%2FdrugfindR&query=%24.Version&style=flat&label=latest-release&color=orange)]
+[![latest-version](https://img.shields.io/badge/dynamic/json?url=https%3A%2F%2Fcogdisreslab.r-universe.dev%2Fapi%2Fpackages%2FdrugfindR&query=%24.Version&style=flat&label=latest-release&color=orange)](https://github.com/CogDisResLab/drugfindR/releases/latest)
 [![license](https://img.shields.io/github/license/CogDisResLab/drugfindR)](https://github.com/CogDisResLab/drugfindR/blob/main/LICENSE)
-
 [![DOI](https://zenodo.org/badge/338354715.svg)](https://zenodo.org/badge/latestdoi/338354715)
+[![Codecov test coverage](https://codecov.io/gh/CogDisResLab/drugfindR/branch/devel/graph/badge.svg)](https://app.codecov.io/gh/CogDisResLab/drugfindR?branch=devel)
 <!-- badges: end -->
 
 drugfindR allows convenient access to the iLINCS Gene Knockdown, Gene Overexpression and Chemical Perturbagen databases and allows you to generate and investigate signatures to identify relevant genes and drugs.

README.md

@@ -10,11 +10,11 @@ experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](h
 
 [![Continuous Integration / R
 Workflows](https://github.com/CogDisResLab/drugfindR/actions/workflows/rworkflows.yml/badge.svg)](https://github.com/CogDisResLab/drugfindR/actions/workflows/rworkflows.yml)
-[![codecov](https://codecov.io/gh/CogDisResLab/drugfindR/branch/main/graph/badge.svg?token=FeAvIeTAiz)](https://codecov.io/gh/CogDisResLab/drugfindR)
-\[![latest-version](https://img.shields.io/badge/dynamic/json?url=https%3A%2F%2Fcogdisreslab.r-universe.dev%2Fapi%2Fpackages%2FdrugfindR&query=%24.Version&style=flat&label=latest-release&color=orange)\]
+[![latest-version](https://img.shields.io/badge/dynamic/json?url=https%3A%2F%2Fcogdisreslab.r-universe.dev%2Fapi%2Fpackages%2FdrugfindR&query=%24.Version&style=flat&label=latest-release&color=orange)](https://github.com/CogDisResLab/drugfindR/releases/latest)
 [![license](https://img.shields.io/github/license/CogDisResLab/drugfindR)](https://github.com/CogDisResLab/drugfindR/blob/main/LICENSE)
-
 [![DOI](https://zenodo.org/badge/338354715.svg)](https://zenodo.org/badge/latestdoi/338354715)
+[![Codecov test
+coverage](https://codecov.io/gh/CogDisResLab/drugfindR/branch/devel/graph/badge.svg)](https://app.codecov.io/gh/CogDisResLab/drugfindR?branch=devel)
 <!-- badges: end -->
 
 drugfindR allows convenient access to the iLINCS Gene Knockdown, Gene

codecov.yml

@@ -0,0 +1,14 @@
+comment: false
+
+coverage:
+  status:
+    project:
+      default:
+        target: auto
+        threshold: 1%
+        informational: true
+    patch:
+      default:
+        target: auto
+        threshold: 1%
+        informational: true