fix: install graphviz in Read the Docs

.readthedocs.yml

@@ -3,7 +3,7 @@ version: 2
 sphinx:
   builder: html
   configuration: docs/conf.py
-  fail_on_warning: false
+  fail_on_warning: true
 
 formats:
   - htmlzip

cspell.json

@@ -188,7 +188,6 @@
         "theano",
         "ticklabels",
         "tolist",
-        "tqdm",
         "unparse",
         "unsrt",
         "untracked",

docs/index.md

@@ -18,8 +18,8 @@ For an overview of upcoming releases and planned functionality, see
 
 :::{dropdown} Original project: PWA Expert System
 
-The original project was the {doc}`expertsystem:index`. AmpForm originates from
-its {mod}`~expertsystem.amplitude` module.
+The original project was the {doc}`PWA Expert System <expertsystem:index>`.
+AmpForm originates from its {mod}`~expertsystem.amplitude` module.
 
 :::
 

reqs/3.6/requirements-dev.txt

@@ -64,7 +64,7 @@ jinja2==2.11.3
 json5==0.9.5
 jsonschema==3.2.0
 jupyter-cache==0.4.2
-jupyter-client==6.1.12
+jupyter-client==6.1.13
 jupyter-console==6.4.0
 jupyter-core==4.7.1
 jupyter-packaging==0.7.12
@@ -113,7 +113,7 @@ pickleshare==0.7.5
 pillow==8.2.0
 pip-tools==6.0.1
 pluggy==0.13.1
-pre-commit==2.11.1
+pre-commit==2.12.0
 prometheus-client==0.10.0
 prompt-toolkit==3.0.18
 ptyprocess==0.7.0
@@ -125,7 +125,6 @@ pycparser==2.20
 pydata-sphinx-theme==0.4.3
 pydeps==1.9.13
 pydocstyle==6.0.0
-pydot==1.4.2
 pyflakes==2.3.1
 pygments==2.8.1
 pylint==2.7.4
@@ -142,6 +141,7 @@ pytoml==0.1.21
 pytz==2021.1
 pyyaml==5.4.1
 pyzmq==22.0.3
+qrules==0.8.0a1
 qtconsole==5.0.3
 qtpy==1.9.0
 regex==2021.4.4
@@ -176,7 +176,7 @@ testpath==0.4.4
 toml==0.10.2
 tornado==6.1
 tox==3.23.0
-tqdm==4.59.0
+tqdm==4.60.0
 traitlets==4.3.3
 typed-ast==1.4.2
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"

reqs/3.6/requirements-doc.txt

@@ -40,7 +40,7 @@ jedi==0.18.0
 jinja2==2.11.3
 jsonschema==3.2.0
 jupyter-cache==0.4.2
-jupyter-client==6.1.12
+jupyter-client==6.1.13
 jupyter-console==6.4.0
 jupyter-core==4.7.1
 jupyter-sphinx==0.3.1
@@ -85,6 +85,7 @@ python-dateutil==2.8.1
 pytz==2021.1
 pyyaml==5.4.1
 pyzmq==22.0.3
+qrules==0.8.0a1
 qtconsole==5.0.3
 qtpy==1.9.0
 requests==2.25.1
@@ -112,7 +113,7 @@ sympy==1.7.1
 terminado==0.9.4
 testpath==0.4.4
 tornado==6.1
-tqdm==4.59.0
+tqdm==4.60.0
 traitlets==4.3.3
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"
 urllib3==1.26.4

reqs/3.6/requirements-extras.txt

@@ -16,9 +16,10 @@ particle==0.14.1
 pyrsistent==0.17.3
 python-constraint==1.4.0
 pyyaml==5.4.1
+qrules==0.8.0a1
 six==1.15.0
 sympy==1.7.1
-tqdm==4.59.0
+tqdm==4.60.0
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"
 zipp==3.4.1
 

reqs/3.6/requirements-sty.txt

@@ -8,7 +8,6 @@ apipkg==1.5
 appdirs==1.4.4
 astroid==2.5.2
 attrs==20.3.0
-backcall==0.2.0
 black==20.8b1
 cfgv==3.2.0
 click==7.1.2
@@ -26,16 +25,13 @@ flake8-polyfill==1.0.2
 flake8-rst-docstrings==0.0.14
 flake8==3.9.0
 gprof2dot==2021.2.21
-graphviz==0.16
 hepunits==2.1.0
 identify==2.2.2
 importlib-metadata==3.10.0
 importlib-resources==3.0.0
 iniconfig==1.1.1
 ipython-genutils==0.2.0
-ipython==7.16.1
 isort==5.8.0
-jedi==0.18.0
 jsonschema==3.2.0
 jupyter-core==4.7.1
 lazy-object-proxy==1.6.0
@@ -48,22 +44,15 @@ nbstripout==0.3.9
 nodeenv==1.5.0
 numpy==1.19.5
 packaging==20.9
-parso==0.8.2
 particle==0.14.1
 pathspec==0.8.1
 pep8-naming==0.11.1
-pexpect==4.8.0
-pickleshare==0.7.5
 pluggy==0.13.1
-pre-commit==2.11.1
-prompt-toolkit==3.0.18
-ptyprocess==0.7.0
+pre-commit==2.12.0
 py==1.10.0
 pycodestyle==2.7.0
 pydocstyle==6.0.0
-pydot==1.4.2
 pyflakes==2.3.1
-pygments==2.8.1
 pylint==2.7.4
 pyparsing==2.4.7
 pyrsistent==0.17.3
@@ -74,18 +63,18 @@ pytest-xdist==2.2.1
 pytest==6.2.3
 python-constraint==1.4.0
 pyyaml==5.4.1
+qrules==0.8.0a1
 regex==2021.4.4
 restructuredtext-lint==1.3.2
 six==1.15.0
 snowballstemmer==2.1.0
 sympy==1.7.1
 toml==0.10.2
-tqdm==4.59.0
+tqdm==4.60.0
 traitlets==4.3.3
 typed-ast==1.4.2
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"
 virtualenv==20.4.3
-wcwidth==0.2.5
 wrapt==1.12.1
 zipp==3.4.1
 

reqs/3.6/requirements-test.txt

@@ -6,33 +6,20 @@
 #
 apipkg==1.5
 attrs==20.3.0
-backcall==0.2.0
 coverage==5.5
-decorator==5.0.5
 execnet==1.8.0
 gprof2dot==2021.2.21
-graphviz==0.16
 hepunits==2.1.0
 importlib-metadata==3.10.0
 importlib-resources==3.0.0
 iniconfig==1.1.1
-ipython-genutils==0.2.0
-ipython==7.16.1
-jedi==0.18.0
 jsonschema==3.2.0
 mpmath==1.2.1
 numpy==1.19.5
 packaging==20.9
-parso==0.8.2
 particle==0.14.1
-pexpect==4.8.0
-pickleshare==0.7.5
 pluggy==0.13.1
-prompt-toolkit==3.0.18
-ptyprocess==0.7.0
 py==1.10.0
-pydot==1.4.2
-pygments==2.8.1
 pyparsing==2.4.7
 pyrsistent==0.17.3
 pytest-cov==2.11.1
@@ -42,13 +29,12 @@ pytest-xdist==2.2.1
 pytest==6.2.3
 python-constraint==1.4.0
 pyyaml==5.4.1
+qrules==0.8.0a1
 six==1.15.0
 sympy==1.7.1
 toml==0.10.2
-tqdm==4.59.0
-traitlets==4.3.3
+tqdm==4.60.0
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"
-wcwidth==0.2.5
 zipp==3.4.1
 
 # The following packages are considered to be unsafe in a requirements file:

reqs/3.6/requirements.txt

@@ -15,9 +15,10 @@ particle==0.14.1
 pyrsistent==0.17.3
 python-constraint==1.4.0
 pyyaml==5.4.1
+qrules==0.8.0a1
 six==1.15.0
 sympy==1.7.1
-tqdm==4.59.0
+tqdm==4.60.0
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"
 zipp==3.4.1
 

reqs/3.7/requirements-dev.txt

@@ -60,7 +60,7 @@ jinja2==2.11.3
 json5==0.9.5
 jsonschema==3.2.0
 jupyter-cache==0.4.2
-jupyter-client==6.1.12
+jupyter-client==6.1.13
 jupyter-console==6.4.0
 jupyter-core==4.7.1
 jupyter-packaging==0.7.12
@@ -109,7 +109,7 @@ pickleshare==0.7.5
 pillow==8.2.0
 pip-tools==6.0.1
 pluggy==0.13.1
-pre-commit==2.11.1
+pre-commit==2.12.0
 prometheus-client==0.10.0
 prompt-toolkit==3.0.18
 ptyprocess==0.7.0
@@ -121,7 +121,6 @@ pycparser==2.20
 pydata-sphinx-theme==0.4.3
 pydeps==1.9.13
 pydocstyle==6.0.0
-pydot==1.4.2
 pyflakes==2.3.1
 pygments==2.8.1
 pylint==2.7.4
@@ -138,6 +137,7 @@ pytoml==0.1.21
 pytz==2021.1
 pyyaml==5.4.1
 pyzmq==22.0.3
+qrules==0.8.0a1
 qtconsole==5.0.3
 qtpy==1.9.0
 regex==2021.4.4
@@ -172,7 +172,7 @@ testpath==0.4.4
 toml==0.10.2
 tornado==6.1
 tox==3.23.0
-tqdm==4.59.0
+tqdm==4.60.0
 traitlets==5.0.5
 typed-ast==1.4.2
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"

reqs/3.7/requirements-doc.txt

@@ -38,7 +38,7 @@ jedi==0.18.0
 jinja2==2.11.3
 jsonschema==3.2.0
 jupyter-cache==0.4.2
-jupyter-client==6.1.12
+jupyter-client==6.1.13
 jupyter-console==6.4.0
 jupyter-core==4.7.1
 jupyter-sphinx==0.3.1
@@ -83,6 +83,7 @@ python-dateutil==2.8.1
 pytz==2021.1
 pyyaml==5.4.1
 pyzmq==22.0.3
+qrules==0.8.0a1
 qtconsole==5.0.3
 qtpy==1.9.0
 requests==2.25.1
@@ -110,7 +111,7 @@ sympy==1.7.1
 terminado==0.9.4
 testpath==0.4.4
 tornado==6.1
-tqdm==4.59.0
+tqdm==4.60.0
 traitlets==5.0.5
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"
 urllib3==1.26.4

reqs/3.7/requirements-extras.txt

@@ -15,9 +15,10 @@ particle==0.14.1
 pyrsistent==0.17.3
 python-constraint==1.4.0
 pyyaml==5.4.1
+qrules==0.8.0a1
 six==1.15.0
 sympy==1.7.1
-tqdm==4.59.0
+tqdm==4.60.0
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"
 zipp==3.4.1
 

reqs/3.7/requirements-sty.txt

@@ -8,12 +8,10 @@ apipkg==1.5
 appdirs==1.4.4
 astroid==2.5.2
 attrs==20.3.0
-backcall==0.2.0
 black==20.8b1
 cfgv==3.2.0
 click==7.1.2
 coverage==5.5
-decorator==5.0.5
 distlib==0.3.1
 docutils==0.16
 execnet==1.8.0
@@ -25,15 +23,12 @@ flake8-polyfill==1.0.2
 flake8-rst-docstrings==0.0.14
 flake8==3.9.0
 gprof2dot==2021.2.21
-graphviz==0.16
 hepunits==2.1.0
 identify==2.2.2
 importlib-metadata==3.10.0
 iniconfig==1.1.1
 ipython-genutils==0.2.0
-ipython==7.22.0
 isort==5.8.0
-jedi==0.18.0
 jsonschema==3.2.0
 jupyter-core==4.7.1
 lazy-object-proxy==1.6.0
@@ -46,22 +41,15 @@ nbstripout==0.3.9
 nodeenv==1.5.0
 numpy==1.20.2
 packaging==20.9
-parso==0.8.2
 particle==0.14.1
 pathspec==0.8.1
 pep8-naming==0.11.1
-pexpect==4.8.0
-pickleshare==0.7.5
 pluggy==0.13.1
-pre-commit==2.11.1
-prompt-toolkit==3.0.18
-ptyprocess==0.7.0
+pre-commit==2.12.0
 py==1.10.0
 pycodestyle==2.7.0
 pydocstyle==6.0.0
-pydot==1.4.2
 pyflakes==2.3.1
-pygments==2.8.1
 pylint==2.7.4
 pyparsing==2.4.7
 pyrsistent==0.17.3
@@ -72,18 +60,18 @@ pytest-xdist==2.2.1
 pytest==6.2.3
 python-constraint==1.4.0
 pyyaml==5.4.1
+qrules==0.8.0a1
 regex==2021.4.4
 restructuredtext-lint==1.3.2
 six==1.15.0
 snowballstemmer==2.1.0
 sympy==1.7.1
 toml==0.10.2
-tqdm==4.59.0
+tqdm==4.60.0
 traitlets==5.0.5
 typed-ast==1.4.2
 typing-extensions==3.7.4.3 ; python_version < "3.8.0"
 virtualenv==20.4.3
-wcwidth==0.2.5
 wrapt==1.12.1
 zipp==3.4.1