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@Computational-Plant-Science

Computational Plant Science Lab

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  1. DIRT DIRT Public

    Digital Imaging of Root Traits: Extract trait measurements from images of monocot and dicot roots.

    Python 23 16

  2. 3D_model_reconstruction_demo 3D_model_reconstruction_demo Public

    Implementation of the 3D reconstruction pipeline optimized for plant branching structures.

    C 14 3

  3. 3D_model_descriptor 3D_model_descriptor Public

    Building a 3D root Descriptor: To encode the maize root structure variation in genotype and interaction with environment using Quaternion representation of maize root Structure

    Python

  4. 3D_Sorghum_phenotyping_pipeline 3D_Sorghum_phenotyping_pipeline Public

    Pipeline: Traits computation from 3D Sorghum root models

    Python

  5. SMART SMART Public

    Plant phenotyping using computer vision: Compute geometrical traits and analyze plant surface colors

    Python 1

  6. 3D_model_traits_demo 3D_model_traits_demo Public

    Computation of root phenes from 3D point clouds.

    Python 5 1

Repositories

Showing 10 of 36 repositories
  • Computational-Plant-Science/3D_beanroot_phenotyping_pipeline’s past year of commit activity
    Makefile 0 BSD-3-Clause 0 0 0 Updated Jun 13, 2024
  • SMART Public

    Plant phenotyping using computer vision: Compute geometrical traits and analyze plant surface colors

    Computational-Plant-Science/SMART’s past year of commit activity
    Python 1 GPL-3.0 0 0 0 Updated Jun 11, 2024
  • 3D_Sorghum_phenotyping_pipeline Public

    Pipeline: Traits computation from 3D Sorghum root models

    Computational-Plant-Science/3D_Sorghum_phenotyping_pipeline’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Jun 11, 2024
  • AI_U2net_color_clustering Public

    A machine learning model U2net and opencv based color clsutering method hat performs object segmentation in a single shot

    Computational-Plant-Science/AI_U2net_color_clustering’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Jun 8, 2024
  • 3D_model_traits_demo Public

    Computation of root phenes from 3D point clouds.

    Computational-Plant-Science/3D_model_traits_demo’s past year of commit activity
    Python 5 1 2 0 Updated Jun 3, 2024
  • Computational-Plant-Science/Drone-Based-Fusarium-Wilt-Detection-in-Lettuce-Using-RGB-Imagery’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Apr 25, 2024
  • Computational-Plant-Science/Image-Mosaicking-Tiling-Python-Toolkit’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Apr 25, 2024
  • Root-Diameter-Prediction-with-Residual-Neural-Network Public

    Root Diameter Prediction with Residual Neural Network

    Computational-Plant-Science/Root-Diameter-Prediction-with-Residual-Neural-Network’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Apr 24, 2024
  • Computational-Plant-Science/Root_Image_Segmentation’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Apr 24, 2024
  • Computational-Plant-Science/DIRT-Pop.v1’s past year of commit activity
    R 0 0 0 0 Updated Mar 10, 2024