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sgvignali committed Aug 24, 2022
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2 changes: 1 addition & 1 deletion README.Rmd
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<!-- badges: end -->

**SDMtune** provides a user-friendly framework that enables the training and the evaluation of species distribution models (SDMs). The package implements functions for data driven variable selection and model tuning and includes numerous utilities to display the results. All the functions used to select variables or to tune model hyperparameters have an interactive real-time chart displayed in the RStudio viewer pane during their execution.
Visit the [package website](https://consbiol-unibern.github.io/SDMtune/) and learn how to use **SDMtune** starting from the first article [Prepare data for the analysis](https://consbiol-unibern.github.io/SDMtune/articles/articles/prepare_data.html).
Visit the [package website](https://consbiol-unibern.github.io/SDMtune/) and learn how to use **SDMtune** starting from the first article [Prepare data for the analysis](https://consbiol-unibern.github.io/SDMtune/articles/prepare-data.html).

## Installation

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14 changes: 7 additions & 7 deletions README.md
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during their execution. Visit the [package
website](https://consbiol-unibern.github.io/SDMtune/) and learn how to
use **SDMtune** starting from the first article [Prepare data for the
analysis](https://consbiol-unibern.github.io/SDMtune/articles/articles/prepare_data.html).
analysis](https://consbiol-unibern.github.io/SDMtune/articles/prepare-data.html).

## Installation

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The file **maxent.jar** can be downloaded
[here](https://biodiversityinformatics.amnh.org/open_source/maxent/)
(note that you need **MaxEnt** version &gt;= 3.4.1 (Steven J. Phillips
et al. 2017)). This file must be copied into the right folder to be
(note that you need **MaxEnt** version \>= 3.4.1 (Steven J. Phillips et
al. 2017)). This file must be copied into the right folder to be
available for the `dismo` package (Hijmans et al. 2017): copy the file
**maxent.jar** into the folder named **java** that is located inside the
folder returned by the following command:
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```

If everything is correctly configured for `dismo`, the following command
will return the used MaxEnt version (make sure that the version is &gt;=
will return the used MaxEnt version (make sure that the version is \>=
3.4.1):

``` r
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<div id="ref-Phillips2017a" class="csl-entry">

Phillips, Steven J., Robert P. Anderson, Miroslav Dudík, Robert E.
Schapire, and Mary E. Blair. 2017. “<span class="nocase">Opening the
black box: an open-source release of Maxent</span>.” *Ecography* 40 (7):
887–93. <https://doi.org/10.1111/ecog.03049>.
Schapire, and Mary E. Blair. 2017. “Opening the Black Box: An
Open-Source Release of Maxent.” *Ecography* 40 (7): 887–93.
https://doi.org/<https://doi.org/10.1111/ecog.03049>.

</div>

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