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tool_usage.md

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Tool usage

Category 1: Tests for regions versus regions

Projection Test

Commands:

rgt-viz projection -r <experiment_matrix_ref> -q <experiment_matrix_que> <output_directory> [options]

Required Inputs:

Option Name Type Default Description
experiment_matrix_ref File None The experiment matrix should contain all the reference regions for projection test. Check more details on Experiment Matrix Format.