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utils

utils

 
 

FISH_pipeline.py

FISH_pipeline.py

 
 

LICENSE

LICENSE

 
 

README.md

README.md

 
 

assignSpotsToNucl.py

assignSpotsToNucl.py

 
 

locFiles.py

locFiles.py

 
 

params.py

params.py

 
 

segment_nuclei_v1.1.6.ijm

segment_nuclei_v1.1.6.ijm

 
 

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FISHingRod

Tools for analyzing Fluorescence In Situ Hybridization (FISH) microscopy data

Requirements

  • Python, NumPy, SciPy, pandas, scikit-image, Matplotlib
  • Jupyter
  • Fiji/ImageJ

Authors

Antoine Coulon antoine.coulon@curie.fr.

Licence

Code under GNU GPL v3 license. See LICENSE file for more information

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Tools for analyzing Fluorescence In Situ Hybridization (FISH) microscopy data

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GPL-3.0 license
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