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SciApps Guide

Goal

Introduce SciApps, a cloud-based platform for building and sharing reproducible bioinformatics workflows across distributed computing and storage systems. This guide will cover accessing CyVerse Data Store, launching analysis jobs, visualizing results, building, sharing, and running workflows.


.. toctree::
        :maxdepth: 2

        Platform guide home <self>
        SciApps Basics and Logging In <step1.rst>
        Viewing and Accessing Data <step2.rst>
        Launching an Analysis Job <step3.rst>
        Building a Workflow <step4.rst>
        The Annotation Tutorial <annotation.rst>
        The Association Tutorial <association.rst>

Prerequisites

Downloads, access, and services

In order to complete this tutorial, you will need access to the following services/software

Prerequisite Preparation/Notes Link/Download
CyVerse account You will need a CyVerse account to complete this exercise Register
SciApps access You will need to request access to SciApps from the user portal. Check the 'My Services' tab; if SciApps is not listed, click the 'Available' tab, locate SciApps and click the link to request access. CyVerse User Portal

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