Skip to content

Commit

Permalink
changed remote address for testing
Browse files Browse the repository at this point in the history
  • Loading branch information
lucananni93 committed Jul 22, 2019
1 parent aed1981 commit 561da7b
Show file tree
Hide file tree
Showing 10 changed files with 13 additions and 13 deletions.
2 changes: 1 addition & 1 deletion doc/source/GMQL.rst
Original file line number Diff line number Diff line change
Expand Up @@ -21,4 +21,4 @@ The GMQL engine is composed by various sub-systems:
GMQL WEB interface
------------------

The GMQL system is publicly available `at this link <http://genomic.elet.polimi.it/gmql-rest/>`_.
The GMQL system is publicly available `at this link <http://gmql.eu/gmql-rest/>`_.
4 changes: 2 additions & 2 deletions doc/source/remote.rst
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ PyGMQL also manages the execution through a remote server (or cluster). In order
feature the user needs to login to the remote service before.

The web service offered by the GeCo group at Politecnico di Milano can be found at
http://genomic.elet.polimi.it/gmql-rest/
http://gmql.eu/gmql-rest/

---------
Loggin in
Expand All @@ -17,7 +17,7 @@ Loggin in
This can be done by firstly specifying the remote server address::

import gmql as gl
gl.set_remote_address("http://genomic.elet.polimi.it/gmql-rest/")
gl.set_remote_address("http://gmql.eu/gmql-rest/")

and then by logging in into the system::

Expand Down
2 changes: 1 addition & 1 deletion doc/source/static/00_Introduction.html
Original file line number Diff line number Diff line change
Expand Up @@ -11814,7 +11814,7 @@ <h2 id="The-GMQL-architecture">The GMQL architecture<a class="anchor-link" href=
</li>
</ul>
<p><img src="https://github.com/DEIB-GECO/GMQL/blob/master/docs/GMQL_V2_Architecture.png?raw=true"></p>
<h2 id="The-Web-Interface">The Web Interface<a class="anchor-link" href="#The-Web-Interface">&#182;</a></h2><p>The classical interface to the GMQL system is from the Web browser. The public available interface offered by the GeCo Team at Politecnico di Milano can be accessed at <a href="http://genomic.elet.polimi.it/gmql-rest/">this link</a>.</p>
<h2 id="The-Web-Interface">The Web Interface<a class="anchor-link" href="#The-Web-Interface">&#182;</a></h2><p>The classical interface to the GMQL system is from the Web browser. The public available interface offered by the GeCo Team at Politecnico di Milano can be accessed at <a href="http://gmql.eu/gmql-rest/">this link</a>.</p>

</div>
</div>
Expand Down
2 changes: 1 addition & 1 deletion doc/source/static/02_Mixing_Local_Remote_Processing.html
Original file line number Diff line number Diff line change
Expand Up @@ -11849,7 +11849,7 @@ <h2 id="Connecting-to-a-remote-GMQL-instance">Connecting to a remote GMQL instan
<div class="input_area">
<div class=" highlight hl-ipython3"><pre><span></span><span class="kn">import</span> <span class="nn">gmql</span> <span class="k">as</span> <span class="nn">gl</span>

<span class="n">gl</span><span class="o">.</span><span class="n">set_remote_address</span><span class="p">(</span><span class="s2">&quot;http://genomic.elet.polimi.it/gmql-rest/&quot;</span><span class="p">)</span>
<span class="n">gl</span><span class="o">.</span><span class="n">set_remote_address</span><span class="p">(</span><span class="s2">&quot;http://gmql.eu/gmql-rest/&quot;</span><span class="p">)</span>
<span class="n">gl</span><span class="o">.</span><span class="n">login</span><span class="p">()</span>
</pre></div>

Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -76,7 +76,7 @@
}
],
"source": [
"gl.set_remote_address(\"http://genomic.elet.polimi.it/gmql-rest/\")\n",
"gl.set_remote_address(\"http://gmql.eu/gmql-rest/\")\n",
"gl.login()"
]
},
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -30,7 +30,7 @@
"1. Register on the remote service by going to its IP address from the web browser\n",
"2. Use the `pygmql_login` tool, which is installed together with the library\n",
"\n",
"In the following, we are going to use the publicly accessible GMQL service offered by the Genomic Computing group at Politecnico di Milano (accessible at http://genomic.elet.polimi.it/gmql-rest/). Since we did not registered to the service, when we the `login` call is encountered, the library will login as GUEST user with limited capabilities (in terms of computation and disk space)."
"In the following, we are going to use the publicly accessible GMQL service offered by the Genomic Computing group at Politecnico di Milano (accessible at http://gmql.eu/gmql-rest/). Since we did not registered to the service, when we the `login` call is encountered, the library will login as GUEST user with limited capabilities (in terms of computation and disk space)."
]
},
{
Expand All @@ -49,7 +49,7 @@
"source": [
"import gmql as gl\n",
"\n",
"gl.set_remote_address(\"http://genomic.elet.polimi.it/gmql-rest/\")\n",
"gl.set_remote_address(\"http://gmql.eu/gmql-rest/\")\n",
"gl.login()"
]
},
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -11854,7 +11854,7 @@ <h1 id="Interfacing-with-an-external-GMQL-service:-Aggregating-the-Chip-Seq-sign
<div class="prompt input_prompt">In&nbsp;[4]:</div>
<div class="inner_cell">
<div class="input_area">
<div class=" highlight hl-ipython3"><pre><span></span><span class="n">gl</span><span class="o">.</span><span class="n">set_remote_address</span><span class="p">(</span><span class="s2">&quot;http://genomic.elet.polimi.it/gmql-rest/&quot;</span><span class="p">)</span>
<div class=" highlight hl-ipython3"><pre><span></span><span class="n">gl</span><span class="o">.</span><span class="n">set_remote_address</span><span class="p">(</span><span class="s2">&quot;http://gmql.eu/gmql-rest/&quot;</span><span class="p">)</span>
<span class="n">gl</span><span class="o">.</span><span class="n">login</span><span class="p">()</span>
</pre></div>

Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -11802,7 +11802,7 @@ <h2 id="Connecting-to-a-remote-GMQL-instance">Connecting to a remote GMQL instan
<li>Register on the remote service by going to its IP address from the web browser</li>
<li>Use the <code>pygmql_login</code> tool, which is installed together with the library</li>
</ol>
<p>In the following, we are going to use the publicly accessible GMQL service offered by the Genomic Computing group at Politecnico di Milano (accessible at <a href="http://genomic.elet.polimi.it/gmql-rest/">http://genomic.elet.polimi.it/gmql-rest/</a>). Since we did not registered to the service, when we the <code>login</code> call is encountered, the library will login as GUEST user with limited capabilities (in terms of computation and disk space).</p>
<p>In the following, we are going to use the publicly accessible GMQL service offered by the Genomic Computing group at Politecnico di Milano (accessible at <a href="http://gmql.eu/gmql-rest/">http://gmql.eu/gmql-rest/</a>). Since we did not registered to the service, when we the <code>login</code> call is encountered, the library will login as GUEST user with limited capabilities (in terms of computation and disk space).</p>

</div>
</div>
Expand All @@ -11814,7 +11814,7 @@ <h2 id="Connecting-to-a-remote-GMQL-instance">Connecting to a remote GMQL instan
<div class="input_area">
<div class=" highlight hl-ipython3"><pre><span></span><span class="kn">import</span> <span class="nn">gmql</span> <span class="k">as</span> <span class="nn">gl</span>

<span class="n">gl</span><span class="o">.</span><span class="n">set_remote_address</span><span class="p">(</span><span class="s2">&quot;http://genomic.elet.polimi.it/gmql-rest/&quot;</span><span class="p">)</span>
<span class="n">gl</span><span class="o">.</span><span class="n">set_remote_address</span><span class="p">(</span><span class="s2">&quot;http://gmql.eu/gmql-rest/&quot;</span><span class="p">)</span>
<span class="n">gl</span><span class="o">.</span><span class="n">login</span><span class="p">()</span>
</pre></div>

Expand Down
2 changes: 1 addition & 1 deletion gmql/RemoteConnection/__init__.py
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
default_address = "http://genomic.elet.polimi.it/gmql-rest/"
default_address = "http://gmql.eu/gmql-rest/"
headers = {
'Accept': 'application/json',
'Content-Type': 'application/json'
Expand Down
2 changes: 1 addition & 1 deletion test/test_remote.py
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@
import logging

gl.set_progress(False)
gl.set_remote_address("http://genomic.elet.polimi.it/gmql-rest/")
gl.set_remote_address("http://gmql.eu/gmql-rest/")


class GMQLRemoteTester(unittest.TestCase):
Expand Down

0 comments on commit 561da7b

Please sign in to comment.