Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

volscope documentation #460

Merged
merged 4 commits into from
May 26, 2024
Merged

volscope documentation #460

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
4 commits
Select commit Hold shift + click to select a range
3084912
volscope documentation and images
dcoeurjo May 25, 2024
1a882b5
changelog
dcoeurjo May 25, 2024
3a7ea32
Merge branch 'master' into docvolscope
kerautret May 26, 2024
a5c4f78
readme
dcoeurjo May 26, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 2 additions & 0 deletions ChangeLog.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -27,6 +27,8 @@
[#452](https://github.com/DGtal-team/DGtalTools/pull/452))
- volscope new vol visualization tool using polyscope (David Coeurjolly,
[#455](https://github.com/DGtal-team/DGtalTools/pull/455))
- volscope documentation enhanced (David Coeurjolly,
[#460](https://github.com/DGtal-team/DGtalTools/pull/460))

- *volumetric*
- volReSample: fix the impossibility to export to vol when ITK is activated
Expand Down
2 changes: 1 addition & 1 deletion README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -198,7 +198,7 @@ Galleries
<td align="center" colspan="2"><a href="https://dgtal-team.github.io/doctools-nightly/Doc3dImplicitSurfaceExtractorByThickening.html" > 3dImplicitSurfaceExtractorByThickening</a> </td>
</tr>
<tr>
<td align="center" colspan="2"><img width=250 src="https://private-user-images.githubusercontent.com/700165/292447134-04037898-33e8-48f5-855c-d7432fe061e8.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3MDYzOTA1NTUsIm5iZiI6MTcwNjM5MDI1NSwicGF0aCI6Ii83MDAxNjUvMjkyNDQ3MTM0LTA0MDM3ODk4LTMzZTgtNDhmNS04NTVjLWQ3NDMyZmUwNjFlOC5wbmc_WC1BbXotQWxnb3JpdGhtPUFXUzQtSE1BQy1TSEEyNTYmWC1BbXotQ3JlZGVudGlhbD1BS0lBVkNPRFlMU0E1M1BRSzRaQSUyRjIwMjQwMTI3JTJGdXMtZWFzdC0xJTJGczMlMkZhd3M0X3JlcXVlc3QmWC1BbXotRGF0ZT0yMDI0MDEyN1QyMTE3MzVaJlgtQW16LUV4cGlyZXM9MzAwJlgtQW16LVNpZ25hdHVyZT04ZmRhODA5YTg2ODQ4Mzg1YzBiZDNlYWRiYmY0NzYxNDYyMzRhNTlkMWM0NDY4MDM5MDBkYmQ3OGJmYzE1YzA3JlgtQW16LVNpZ25lZEhlYWRlcnM9aG9zdCZhY3Rvcl9pZD0wJmtleV9pZD0wJnJlcG9faWQ9MCJ9.LZ85J7dmRixTVIqho3NLnSQjllhEttiX7Z2yki3xNtk"</td>
<td align="center" colspan="2"><img width=250 src="doc/images/volscope-surface.png"</td>

</tr>
<tr>
Expand Down
Binary file added doc/images/volscope-surface.png
View file
Open in desktop
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file added doc/images/volscope-volumetric.png
View file
Open in desktop
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
2 changes: 1 addition & 1 deletion doc/visualization.dox
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@

@section visualization_Doc Visualization


- @ref volscope : a new generic VOL file viewer using polyscope.
- @ref Doc2dCompImage : compare images and displays differences (squared and absolute differences).
- @ref CompSurfelData : computes generic scalar surfel data comparisons (squared error) ( given from an input data file and from a reference one).
- @ref Doc3DCurvatureViewer : permits to compute and visualize mean or gaussian curvature of binary shapes.
Expand Down
9 changes: 9 additions & 0 deletions visualisation/volscope.cpp
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -70,6 +70,15 @@ typedef Shortcuts<Z3i::KSpace> SH3;
-m, --min INT For isosurface visualization and voxel filtering, specifies the threshold min (excluded) (default: 0).
-M, --max INT For isosurface visualization and voxel filtering, specifies the threshold max (included) (default: 255).
@endcode
@image html volscope-surface.png "Default visualization mode." width=50%
@image html volscope-volumetric.png "Volumetric visualization using polyscope slice planes." width=50%
**/

int main(int argc, char**argv)
Expand Down
Loading