Transitioning docs to github actions

[aappling-usgs]

On the GitHub site I set the pages deployment to use GitHub actions. Ran the usethis and pkgdown commands noted in the commit messages:

R CMD INSTALL
pkgdown::clean_site()
pkgdown::build_site()
usethis::use_github_action("pkgdown")
usethis::use_pkgdown_github_pages()

Will this be enough?

[aappling-usgs]

I tried to use pkgdown with github actions to build the vignettes, and adding the pak:pkgdepends line for unitted in the DESCRIPTION got me through the dependency installation step, but then I hit this error and got discouraged, because I know the darn thing builds locally:

-- Building articles -----------------------------------------------------------
Writing 'articles/index.html'
Reading 'vignettes/data_prep.Rmd'
Writing 'articles/data_prep.html'
Reading 'vignettes/get_started.Rmd'
-- RMarkdown error -------------------------------------------------------------

Quitting from lines 123-124 [unnamed-chunk-1] (get_started.Rmd)
--------------------------------------------------------------------------------
Error in `map()`:
ℹ In index: 2.
Caused by error in `render_rmarkdown()`:
! Failed to render RMarkdown
Caused by error:
! in callr subprocess.
Caused by error:
! can't find metabolism parameters GPP.daily, ER.daily, K600.daily
Backtrace:
     ▆
  1. ├─base::tryCatch(...)
  2. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
  3. │   ├─base (local) tryCatchOne(...)
  4. │   │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
  5. │   └─base (local) tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
  6. │     └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
  7. │       └─base (local) doTryCatch(return(expr), name, parentenv, handler)
  8. ├─base::withCallingHandlers(...)
  9. ├─base::saveRDS(...)
 10. ├─base::do.call(...)
 11. ├─base (local) `<fn>`(...)
 12. └─global `<fn>`(...)
 13.   └─rmarkdown::render(...)
 14.     └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
 15.       └─knitr:::process_file(text, output)
 16.         ├─base::withCallingHandlers(...)
 17.         ├─base::withCallingHandlers(...)
 18.         ├─knitr:::process_group(group)
 19.         └─knitr:::process_group.block(group)
 20.           └─knitr:::call_block(x)
 21.             └─knitr:::block_exec(params)
 22.               └─knitr:::eng_r(options)
 23.                 ├─knitr:::in_input_dir(...)
 24.                 │ └─knitr:::in_dir(input_dir(), expr)
 25.                 └─knitr (local) evaluate(...)
 26.                   └─evaluate::evaluate(...)
 27.                     └─evaluate:::evaluate_call(...)
 28.                       ├─base (local) handle(...)
 29.                       ├─base::withCallingHandlers(...)
 30.                       ├─base::withVisible(value_fun(ev$value, ev$visible))
 31.                       └─knitr (local) value_fun(ev$value, ev$visible)
 32.                         └─knitr (local) fun(x, options = options)
 33.                           ├─base::withVisible(knit_print(x, ...))
 34.                           ├─knitr::knit_print(x, ...)
 35.                           └─knitr:::knit_print.default(x, ...)
 36.                             └─evaluate (local) normal_print(x)
 37.                               ├─methods::show(x)
 38.                               └─methods::show(x)
 39.                                 ├─streamMetabolizer::get_params(...)
 40.                                 ├─streamMetabolizer:::get_params.metab_bayes(...)
 41.                                 ├─base::NextMethod()
 42.                                 └─streamMetabolizer:::get_params.metab_model(...)
Execution halted
Error: Process completed with exit code 1.

[aappling-usgs]

Nope, the pages at http://usgs-r.github.io/streamMetabolizer/ have updated content but are still not rendering correctly.