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Fixes:
Updated error catching logic to standardise case before catching ExecuteException error when deploying with Docker-SSH.
The collate_experiment_files function is responsible for constructing the experiment directory that is eventually deployed. Due to an oversight, the original version was written in a way such that it was impossible to override built-in Dallinger resources using the extra_files hook; such cases were instead silently ignored. This has now been rectified.
Added db.session.commit() at the end of scheduled task check_db_for_missing_notifications in case the server process has to be restarted. This would cause errors otherwise, because there would never be a moment at which the connection could be gracefully terminated.
Fixed URL link of Dallinger logo.
Infrastructure: Update dependencies; add pyopenssl to install_requires in setup.py.