This is code used in Fine-grained, nonlinear registration of live cell movies reveals spatiotemporal organization of diffuse molecular processes, PLOS Computational Biology, 2022, 18(12): e1009667, written by Xuexia Jiang, Tadamoto Isogai, Joseph Chi, Gaudenz Danuser.
Example data is provided here.
RegisterCell is the MATLAB script to run the code.
Script usage:
strFolderBase = ['/Path_of_folder_with_Example_data' filesep];
strDonor = 'Donor/20160318 Cell4 Cdc42 CFP_';
strRatio = 'Cdc42_Ratio/20160318 Cell4 Cdc42 Ratio_';
numFrames = 181;
outPath = '/Desired_out_path/out.mat';
RegisterCell(strFolderBase, strDonor, strRatio, numFrames, outPath)