python-package.yml

.github/workflows/python-package.yml

@@ -1,4 +1,4 @@
-# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
+# This workflow will install Python dependencies, run tests, and lint with a variety of Python versions
 # For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python
 
 name: Python package
@@ -31,10 +31,10 @@ jobs:
         if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
     - name: Lint with flake8
       run: |
-        # stop the build if there are Python syntax errors or undefined names
-        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
-        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
-        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+        # Stop the build if there are Python syntax errors or undefined names
+        flake8 DrugGeneExplorer.py --count --select=E9,F63,F7,F82 --show-source --statistics
+        # Exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
+        flake8 DrugGeneExplorer.py --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
     - name: Test with pytest
       run: |
-        pytest
+        pytest DrugGeneExplorer.py