update yml file

DavisLaboratory · Jan 9, 2024 · 060276e · 060276e
1 parent e606623
commit 060276e
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/.github/workflows/check-bioc.yml b/.github/workflows/check-bioc.yml
@@ -52,9 +52,9 @@ jobs:
       fail-fast: false
       matrix:
         config:
-          - { os: ubuntu-latest, r: 'devel', bioc: '3.19', cont: "bioconductor/bioconductor_docker:devel", rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" }
+          # - { os: ubuntu-latest, r: 'devel', bioc: '3.19', cont: "bioconductor/bioconductor_docker:devel", rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" }
           # - { os: ubuntu-latest, r: 'devel', bioc: '3.18', cont: "bioconductor/bioconductor_docker:RELEASE_3_18", rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" }
-          # - { os: ubuntu-latest, r: '4.3.2', bioc: '3.18', cont: "bioconductor/bioconductor_docker:RELEASE_3_18", rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" }
+          - { os: ubuntu-latest, r: '4.3.2', bioc: '3.18', cont: "bioconductor/bioconductor_docker:RELEASE_3_18", rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" }
           - { os: macOS-latest, r: '4.3.2', bioc: '3.18'}
           - { os: windows-latest, r: '4.3.2', bioc: '3.18'}
           ## Check https://github.com/r-lib/actions/tree/master/examples
@@ -66,7 +66,7 @@ jobs:
       TZ: UTC
       GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
-      UPGRADE_PKGS: ${{ matrix.config.bioc >= '3.18' }}
+      UPGRADE_PKGS: ${{ matrix.config.bioc < '3.18' }}
 
     steps:
 
@@ -205,7 +205,7 @@ jobs:
           remotes::install_local(dependencies = TRUE, repos = BiocManager::repositories(), build_vignettes = TRUE, upgrade = TRUE, force = TRUE)
         shell: Rscript {0}
 
-      - name: install Matrix 1.6.1.1 for BiocVersion >= 3.18
+      - name: install Matrix 1.6.1.1 for BiocVersion == 3.18
         if: ${{ matrix.config.bioc }} == "3.18" && ${{ env.UPGRADE_PKGS }}
         run: |
           Sys.getenv("UPGRADE_PKGS")