dd redefined

DecBayComp · Mar 16, 2018 · a3d91ff · a3d91ff
1 parent d600697
commit a3d91ff
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Showing 25 changed files with 677 additions and 303 deletions.
diff --git a/doc/api.rst b/doc/api.rst
@@ -16,5 +16,4 @@ The recommended starting point is :mod:`tramway.helper`.
     tramway.feature
     tramway.utils
 
-.. |tramway| replace:: **TRamWAy**
 
diff --git a/doc/commandline.rst b/doc/commandline.rst
@@ -171,8 +171,3 @@ To sum up this primer, the content of the *example.rwa* file that results from a
 
 
 
-.. |txt| replace:: *.txt*
-.. |xyt| replace:: *.xyt*
-.. |trxyt| replace:: *.trxyt*
-.. |rwa| replace:: *.rwa*
-
diff --git a/doc/concepts.rst b/doc/concepts.rst
@@ -20,5 +20,3 @@ As such, maps of these parameters can readily exhibit descriptive information.
 A further step consists of extracting features from these maps.
 
 
-.. |tramway| replace:: **TRamWAy**
-
diff --git a/doc/conf.py b/doc/conf.py
@@ -129,6 +129,12 @@ def __getattr__(cls, name):
 # If true, `todo` and `todoList` produce output, else they produce nothing.
 todo_include_todos = False
 
+try:
+	import codecs
+	with codecs.open('epilog.txt', 'r', encoding='utf-8') as f:
+		rst_epilog = f.read()
+except:
+	pass
 
 # -- Options for HTML output ----------------------------------------------
 

diff --git a/doc/datamodel.rst b/doc/datamodel.rst
@@ -101,11 +101,3 @@ Quantifier '*last*' is the default one.
 See also :func:`~tramway.core.analyses.lazy.find_artefacts` for more options.
 
 
-.. |txt| replace:: *.txt*
-.. |xyt| replace:: *.xyt*
-.. |trxyt| replace:: *.trxyt*
-.. |rwa| replace:: *.rwa*
-.. |seconds| replace:: **seconds**
-.. |um| replace:: **µm**
-.. |tramway| replace:: **TRamWAy**
-
diff --git a/doc/epilog.txt b/doc/epilog.txt
@@ -0,0 +1,18 @@
+
+.. |tramway| replace:: **TRamWAy**
+.. _InferenceMAP: https://research.pasteur.fr/en/software/inferencemap/
+
+.. |txt| replace:: *.txt*
+.. |xyt| replace:: *.xyt*
+.. |trxyt| replace:: *.trxyt*
+.. |rwa| replace:: *.rwa*
+
+.. |seconds| replace:: **seconds**
+.. |um| replace:: **µm**
+
+.. html only
+.. _(D): inference#inference_d
+.. _(D,F): inference#inference_df
+.. _(D,Drift): inference#inference_dd
+.. _(D,V): inference#inference_dv
+
diff --git a/doc/index.rst b/doc/index.rst
@@ -100,16 +100,3 @@ Where to start
 	api
 
 
-.. in commandline, datamodel, 
-.. |txt| replace:: *.txt*
-.. in commandline, datamodel, 
-.. |xyt| replace:: *.xyt*
-.. |trxyt| replace:: *.trxyt*
-.. in datamodel, 
-.. |rwa| replace:: *.rwa*
-.. in datamodel, 
-.. |seconds| replace:: **seconds**
-.. |um| replace:: **µm**
-.. in index, installation, concepts, datamodel, api, license, inference
-.. |tramway| replace:: **TRamWAy**
-