bug fix in command-line

DecBayComp · Mar 19, 2018 · d80f0d4 · d80f0d4
1 parent 7d25b06
commit d80f0d4
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Showing 5 changed files with 19 additions and 13 deletions.
diff --git a/examples/glycine_receptor.py b/examples/glycine_receptor.py
@@ -16,9 +16,9 @@
 
 
 methods = ['grid', 'kdtree', 'kmeans', 'gwr']
-default_localization_error = 0.001
-default_prior_diffusivity = 0.01
-default_prior_potential = 0.1
+default_localization_error = 0.03
+default_prior_diffusivity = 0.05
+default_prior_potential = 0.05
 
 
 arguments = [

diff --git a/examples/resolution.py b/examples/resolution.py
@@ -20,9 +20,9 @@
 
 
 methods = ['grid', 'kdtree', 'kmeans', 'gwr']
-default_localization_error = 0.001
-default_prior_diffusivity = 0.01
-default_prior_potential = 0.1
+default_localization_error = 0.03
+default_prior_diffusivity = 0.05
+default_prior_potential = 0.05
 
 default_ref_distances = [.36, .27, .18, .09]
 min_location_count = 20

diff --git a/examples/sinks.py b/examples/sinks.py
@@ -13,9 +13,9 @@
 
 
 method = 'gwr'
-localization_error = 0.001
-priorD = 0.01
-priorV = 0.01
+localization_error = 0.03
+priorD = 0.05
+priorV = 0.05
 minD = -localization_error
 
 

diff --git a/examples/sliding_window.py b/examples/sliding_window.py
@@ -20,9 +20,9 @@
 name = 'regular_temporal_mesh'
 
 method = 'grid'
-localization_error = 0.001
-priorD = 0.01
-#priorV = 0.1
+localization_error = 0.03
+priorD = 0.05
+#priorV = 0.05
 minD = -localization_error
 
 

diff --git a/tramway/__main__.py b/tramway/__main__.py
@@ -34,9 +34,15 @@ def _parse_args(args):
 	except KeyError:
 		pass
 	try:
-		input_files += kwargs.pop('input_file')
+		more_input_files = kwargs.pop('input_file')
 	except KeyError:
 		pass
+	else:
+		if more_input_files:
+			if isinstance(more_input_files, list):
+				input_files += more_input_files
+			else:
+				input_files.append(more_input_files)
 	if not input_files:
 		print('please specify input file(s)')
 		sys.exit(1)