DeepLabCut MacOS Pyenv Build Crashes on Label_Frames #1742
Comments
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@JacobBumgarner can you run as pythonw -m deeplabcut ? that is what we support for macOS |
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Unfortunately Pyenv doesn’t create shims for I can create an issue over on the Pyenv page if you think this isn’t a DLC issue! Thanks for your help! |
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@JacobBumgarner, any reason why you chose to install deeplabcut without conda or venv? I have no problem labeling frames on my mac (Monterey) using either one, so I suspect this has to do with your pyenv installation 😕 |
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Frankly, I just tried using pyenv because it is my main environment manager. I originally used conda when I started with python development, but chose to switch to pyenv/virtualenv because I had some trouble with PyQt5 compatibility when I was developing VesselVio. Those compatibility issues have since gone away, but I've stayed with pyenv because it works well for me. Having said this - I am able to use DLC with conda on my mac (Big Sur 11.6.5). Because DLC has so many other viable deployment options other than pyenv, I'm going to close this. No need to keep an unnecessary issue open :) This issue can at least exist in case others try to use DLC with pyenv and can't figure out what's going on. The solution: don't be picky and just use conda! |
Is there an existing issue for this?
Bug description
I'm running DeepLabCut on my Mac (11.6.2), but every time I go to label frames, the program crashes. The long error report that's being spit out can be seen below; I haven't been able to figure out what's going on.
I've been trying to run the package on a Pyenv build (python version 3.8.12) with the latest versions of DLC. Because Pyenv doesn't provide a shim for wxPython (pythonw), I installed the 3.8.12 as a framework build. This allows me to run the GUI version of DLC, but a crash occurs when I try to label frames with the GUI. This happens if I'm running DLC from the GUI or if I just run
deeplabcut.label_frames(config_path). The label_frame GUI opens, but the crash specifically occurs when a folder with frames to be labeled is selected and loaded.I thought this might be an issue specific to Pyenv, so I installed Anaconda, and after running
conda install python.appin the DLC environment, I can label frames successfully, indicating that this problem is specific to Pyenv.Are there any ideas of how to get DLC working with Pyenv? If not - I can just continue using conda. Thanks in advance!
Operating System
macOS Big Sur 11.6.2
DeepLabCut version
deeplabcut==2.2.0.6
DeepLabCut mode
single animal
Device type
CPU - 2.6 GHz 6-Core Intel Core i7
Steps To Reproduce
Install Pyenv with brew and set up all of the correct shim/shell modifications
Install python 3.8.12 using
env PYTHON_CONFIGURE_OPTS="--enable-framework" pyenv install 3.8.12and update pippip install -U pipInstall DeepLabCut
pip install deeplabcut 'deeplabcut[gui]'Open DLC from the GUI or try to just label frames.
python -m deeplabcutor after opening python and loading the config path,deeplabcut.label_frames(config_path)Cause the crash by loading a folder with the frames to label from the DLC path.
Relevant log output
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