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28 Open 306 Closed
28 Open 306 Closed
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Issues list

re-order add_feature arguments covariates modules from the 'features' subpackage disc Discussion needed, to better define the task/s
#633 opened Jul 22, 2024 by DaniBodor
2
Residue not found bug Something isn't working Query query module related issues
#613 opened Jun 20, 2024 by imerelli
@DaniBodor @gcroci2
1
Add single proteins/molecules class stale issue not touched from too much time
#605 opened May 21, 2024 by gcroci2
Provide the trained models for various scenarios. feature New feature to add stale issue not touched from too much time
#602 opened Mar 22, 2024 by amjjbonvin
5
Create a tutorial for the antibody-antigen docking models use case blocked
#556 opened Jan 15, 2024 by gcroci2 M1.4: Tutorials&Datasets
Create a tutorial for the protein-ligand complexes use case blocked
#555 opened Jan 15, 2024 by gcroci2 M1.4: Tutorials&Datasets
Add example data for antibody-antigen docking models use case disc Discussion needed, to better define the task/s needs info more information is needed stale issue not touched from too much time
#553 opened Jan 15, 2024 by gcroci2 M1.4: Tutorials&Datasets
1
Add example data for protein-ligand complexes use case disc Discussion needed, to better define the task/s needs info more information is needed stale issue not touched from too much time
#552 opened Jan 15, 2024 by gcroci2 M1.4: Tutorials&Datasets
1
Create tests and docs for multiple-chain graphs blocked
#551 opened Jan 15, 2024 by gcroci2 M1.3: Multiple-chains
Create tests and docs for protein-ligand graphs blocked
#550 opened Jan 15, 2024 by gcroci2 M1.2: Protein-ligands
Deal with residue features in protein-ligand graphs blocked
#548 opened Jan 15, 2024 by DaniBodor M1.2: Protein-ligands
Allow for multiple-chain graphs blocking This issue blocks the others disc Discussion needed, to better define the task/s stale issue not touched from too much time
#547 opened Jan 15, 2024 by gcroci2 M1.3: Multiple-chains
6
Consider allowing mixed resolution graphs for protein-ligand graphs blocked disc Discussion needed, to better define the task/s
#546 opened Jan 15, 2024 by gcroci2 M1.2: Protein-ligands
Create tests and docs for protein-nucleic acid graphs blocked
#545 opened Jan 15, 2024 by DaniBodor M1.1: Protein-nucleic acids
Allow for none-residue atom entries for protein-ligand graphs blocking This issue blocks the others stale issue not touched from too much time
#544 opened Jan 15, 2024 by gcroci2 M1.2: Protein-ligands
1
Add nucleotides to aminoacidlist for protein-nucleic acid graphs blocking This issue blocks the others stale issue not touched from too much time
#543 opened Jan 15, 2024 by DaniBodor M1.1: Protein-nucleic acids
1
Fix build for Python 3.11 bug Something isn't working CI continuous integration
#540 opened Jan 3, 2024 by gcroci2
@gcroci2
2
Add GitHub Action for testing Dockerfile CI continuous integration
#529 opened Nov 28, 2023 by gcroci2
@gcroci2
1
evaluate whether we want to stop suppressing errors by default in _process_one_query method of QueryCollection
#520 opened Nov 6, 2023 by DaniBodor
@DaniBodor
2
Make MapMethod an attribute of GridSettings in deeprank2.grid module nice to have low priority issues stale issue not touched from too much time
#516 opened Nov 1, 2023 by DaniBodor
1
make _set_feature_modules to return ModuleType objects nice to have low priority issues stale issue not touched from too much time
#512 opened Oct 9, 2023 by DaniBodor
1
variant residue is only added to atomic graphs, but not residue graphs bug Something isn't working needs info more information is needed stale issue not touched from too much time
#511 opened Oct 9, 2023 by DaniBodor
1
Integrate PDBprep feature New feature to add stale issue not touched from too much time tools tools for users to interact with deeprank
#509 opened Oct 4, 2023 by DaniBodor
1
@DaniBodor
2
Refactor deeprank2.tools.target.add_targets function nice to have low priority issues stale issue not touched from too much time
#499 opened Sep 20, 2023 by gcroci2
1
Create feature classes nice to have low priority issues stale issue not touched from too much time
#486 opened Sep 5, 2023 by DaniBodor
2
ProTip! Exclude everything labeled bug with -label:bug.