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Parse MODFLOW6 input (partially) #688

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Parse MODFLOW6 input (partially) #688

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Commits on Mar 2, 2022

  1. Add functionality for writing structured data to DISU

    @Huite
    Huite committed Mar 2, 2022
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Commits on Mar 3, 2022

  1. Rename to LowLevel; add pkg conversion to disu

    @Huite
    Huite committed Mar 3, 2022
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Commits on Apr 4, 2022

  1. Make a start with reading MODFLOW6 input files

    @Huite
    Huite committed Apr 4, 2022
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  2. Simulation.open() seems to be running. 

    Introduce StorageBase for Storage packages to avoid repetition
    @Huite
    Huite committed Apr 4, 2022
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Commits on Apr 6, 2022

  1. Adjustments: 

    * Use pandas for ~3 times faster reading of list input
* Add logic for mimicking parts of Fortran read intrinsic: double formats (to_float), comma and whitespace separation (split_string), weird concatenation operators in text files (read_fortran_deflated_text_array).
* Allow parse_option to return more than one option (required for auxiliary).
* Add auxiliary and boundnames entries to list input dtype.
* Fix delr, delc (both 1D) and top (2D) in read_dis_blockfile.
* Intercept errors and attach file name.
    @Huite
    Huite committed Apr 6, 2022
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  2. Merge branch 'dupuit' into parse-mf6-input

    @Huite
    Huite committed Apr 6, 2022
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Commits on Apr 8, 2022

  1. Use package name for storage directory

    @Huite
    Huite committed Apr 8, 2022
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  2. Intercept NaNs as xarray yreplaces None by NaN when writing to file

    @Huite
    Huite committed Apr 8, 2022
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Commits on May 4, 2022

  1. Merge branch 'master' into parse-mf6-input

    @Huite
    Huite committed May 4, 2022
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Commits on May 6, 2022

  1. Do not duplicate entry when replacing exponents when casting to float

    @Huite
    Huite committed May 6, 2022
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Commits on May 10, 2022

  1. Write low level DISU fixes

    @Huite
    Huite committed May 10, 2022
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  2. newline in error message

    @Huite
    Huite committed May 10, 2022
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  3. Add a data array reshape in utils

    @Huite
    Huite committed May 10, 2022
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  4. More comments on mf6 header sizes in output files

    @Huite
    Huite committed May 10, 2022
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  5. Read DISU head output

    @Huite
    Huite committed May 10, 2022
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  6. Add name to open_hds_like

    @Huite
    Huite committed May 10, 2022
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Commits on May 16, 2022

  1. Uncomment jit statement

    @Huite
    Huite committed May 16, 2022
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  2. Warning message formatting

    @Huite
    Huite committed May 16, 2022
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Commits on May 18, 2022

  1. Add tests for read_input/common.py and grid_data.py

    @Huite
    Huite committed May 18, 2022
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Commits on May 19, 2022

  1. Merge branch 'master' into parse-mf6-input

    @Huite
    Huite committed May 19, 2022
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  2. format

    @Huite
    Huite committed May 19, 2022
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  3. Tests for mf6 read_input: grid_data and list_input

    @Huite
    Huite committed May 19, 2022
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  4. Update disu connectivity tests

    @Huite
    Huite committed May 19, 2022
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  5. Use textwrap for test text content

    @Huite
    Huite committed May 19, 2022
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  6. Forgot to use a tmp_path fixture

    @Huite
    Huite committed May 19, 2022
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Commits on May 20, 2022

  1. More unit tests and integration test for mf6 input reading

    @Huite
    Huite committed May 20, 2022
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Commits on May 23, 2022

  1. Add logic for reading model input of classes that are DIS, DISV, or D… 

    …ISU specific
    @Huite
    Huite committed May 23, 2022
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  2. Add logic for reading WellDisStructured 

    * Do not convert to dense (grid) form
* Add optional keyword `sparse_to_dense` in list input reading functions
* Update test to read Well data
    @Huite
    Huite committed May 23, 2022
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Commits on May 25, 2022

  1. Move dupuit example to a separate repo

    @Huite
    Huite committed May 25, 2022
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  2. Add to_disu tests

    @Huite
    Huite committed May 25, 2022
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  3. Merge branch 'master' into parse-mf6-input

    @Huite
    Huite committed May 25, 2022
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  4. Remove unused bas module from mf6

    @Huite
    Huite committed May 25, 2022
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Commits on Jun 14, 2022

  1. Ensure the applying the factor doesn't cast to a different type

    @Huite
    Huite committed Jun 14, 2022
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  2. Space in warning

    @Huite
    Huite committed Jun 14, 2022
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  3. Add angledegx for connection normal in disu from dis method

    @Huite
    Huite committed Jun 14, 2022
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Commits on Jun 15, 2022

  1. Include angldegx correctly in disu input

    @Huite
    Huite committed Jun 15, 2022
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Commits on Jun 20, 2022

  1. Use node number for DISU list based input, rather than to start numbe… 

    …ring at node 0 for every subset of a grid.
    @Huite
    Huite committed Jun 20, 2022
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Commits on Jun 23, 2022

  1. Add index_col=False to read_text_listinput

    @Huite
    Huite committed Jun 23, 2022
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Commits on Aug 17, 2022

  1. Take 1-based indexing into account for MODFLOW periods

    @Huite
    Huite committed Aug 17, 2022
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