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@DeplanckeLab

Deplancke's Lab

Popular repositories

  1. BRB-seqTools BRB-seqTools Public

    Suite of tools for processing BRB-seq data

    Java 25 10

  2. ASAP ASAP Public

    ASAP : Automated Single-cell Analysis Pipeline

    Java 23 10

  3. ChromatinHD ChromatinHD Public

    High-definition modeling of chromatin + transcriptomics data

    Python 16

  4. Live-seq Live-seq Public

    Live-seq

    R 6 5

  5. SSPCI SSPCI Public

    Somatic stem and progenitor cell identification based on single-cell RNA-sequencing data

    R 3

  6. Areg Areg Public

    Processing of single-cell (Fluidigm C1 and 10x) and population (Truseq and brbseq) RNA-seq data related to Areg discovery and characterisation in mouse subcutaneous stromal vascular fraction cells

    HTML 3 1

Repositories

Showing 10 of 30 repositories
  • scfair Public

    an initiative to standardize single-cell genomics data and promote findable, accessible, interoperable, and reusable single-cell data.

    JavaScript 0 0 0 0 Updated May 6, 2024
  • dgrpool_web Public

    DGRPool is a web application designed to serve as a comprehensive repository for Drosophila Genetic Reference Panel (DGRP) phenotyping datasets.

    Ruby 0 GPL-3.0 0 27 0 Updated May 2, 2024
  • TF-seq Public

    Material and source code for TF-seq manuscript

    HTML 0 CC0-1.0 0 1 0 Updated Apr 16, 2024
  • updeplasrv1 Public

    Scripts for updeplasrv1 Web server (Dockerized)

    CSS 0 GPL-3.0 0 0 0 Updated Apr 5, 2024
  • ASAP Public

    ASAP : Automated Single-cell Analysis Pipeline

    Java 23 GPL-3.0 10 0 0 Updated Apr 3, 2024
  • ChromatinHD Public

    High-definition modeling of chromatin + transcriptomics data

    Python 16 MIT 0 5 0 Updated Apr 3, 2024
  • Chromatin_modules Public

    Chromatin Modules across cell types.The code

    Python 1 MIT 0 0 0 Updated Mar 6, 2024
  • FastReadCounter Public

    Tool for fast counting of reads from BAM file into genomic ranges (GTF, BED, VCF)

    Java 0 GPL-3.0 0 2 0 Updated Dec 20, 2023
  • TFseqTools Public

    A suite of tools for the pre-processing of TF-seq data

    Java 0 GPL-3.0 0 0 0 Updated Dec 14, 2023
  • Numts_Aaeg Public
    HTML 0 0 0 0 Updated Dec 12, 2023
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