Use micromamba container image in tests CI #35

	name: httomolibgpu tests on Iris

	on:
	- pull_request
	- push

	jobs:
	build-linux:
	runs-on: iris-gpu
	container:
	image: mambaorg/micromamba:1.5.8-focal-cuda-11.7.1
	env:
	NVIDIA_VISIBLE_DEVICES: ${{ env.NVIDIA_VISIBLE_DEVICES }}

	defaults:
	run:
	shell: bash -l {0}

	steps:
	- name: Checkout repository code
	uses: actions/checkout@v3
	with:
	ref: "main"
	fetch-depth: 0

	- name: Install dependencies in base conda env
	run: \|
	micromamba install -y -n base -f conda/environment.yml

	- name: Install httomolibgpu
	run: \|
	pip install .[dev]
	micromamba list

	- name: Run tests
	run: \|
	pytest tests/

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