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Proposal for simplified demo #24
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9a307cb
simplify example prototype
EiffL 34206ca
Merge branch 'joss-paper' into EiffL/joss-paper
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Merge branch 'joss-paper' into EiffL/joss-paper
EiffL e465af3
updating implementation
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updating implementation
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Update examples/lpt_nbody_demo.py
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updating example
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add back missing import
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clean up demo
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update the notebook and adding a readme
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apply cleanup of axis ordering and naming
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# Use-Case Examples | ||
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This directory contains examples of how to use the jaxDecomp library on a few use cases. | ||
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## Distributed LPT Cosmological Simulation | ||
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This example demonstrates the use of the 3D distributed FFT and halo exchange functions in the `jaxDecomp` library to implement a distributed LPT cosmological simulation. We provide a notebook to visualize the results of the simulation in [visualizer.ipynb](visualizer.ipynb). | ||
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To run the demo, some additional dependencies are required. You can install them by running: | ||
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```bash | ||
pip install jax-cosmo | ||
``` | ||
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Then, you can run the example by executing the following command: | ||
```bash | ||
mpirun -n 4 python lpt_nbody_demo.py --nc 256 --box_size 256 --pdims 4x4 --halo_size 32 --output out | ||
``` | ||
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We also include an example of a slurm script in [submit_rusty.sbatch](submit_rusty.sbatch) that can be used to run the example on a slurm cluster with: | ||
```bash | ||
sbatch submit_rusty.sbatch | ||
``` |
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isn't your sbatch specific for a cluster?
It won't work for JZ for example
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yeah, but it gives an example, feel free to modify it and/or add a slurm script for jean zay