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Raw nanopore reads vs CANU-corrected nanopore reads? #55

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danledinh opened this issue May 7, 2021 · 1 comment

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danledinh commented May 7, 2021

Would you recommend using CANU-corrected minion reads as suggested in this publication? https://pubmed.ncbi.nlm.nih.gov/32419382/

Is HLA-LA capable of producing good results from raw minion reads?

AlexanderDilthey added the question label

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AlexanderDilthey commented Jul 19, 2023

I have not tested this myself. Raw MinION reads should work reasonably well.

Best,

Alex

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