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DiltheyLab

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  1. HLA-LA HLA-LA Public

    Fast HLA type inference from whole-genome data

    C++ 127 41

  2. MetaMaps MetaMaps Public

    Long-read metagenomic analysis

    Perl 99 23

  3. graph-genome-workbench graph-genome-workbench Public

    Software, workflows and information for working with graph genomes

    Python 5

  4. MHC-annotation MHC-annotation Public

    Tools to annotate haplotypes of MHC with gene and transcript information

    Python 5

  5. SAM2Alignment SAM2Alignment Public

    C++ 3

  6. ContigAnalysisScripts ContigAnalysisScripts Public

    several small python scripts to analyse long read and short read data for scaffolding MHC contigs

    Python 2

Repositories

Showing 10 of 12 repositories
  • graph-genome-workbench Public

    Software, workflows and information for working with graph genomes

    DiltheyLab/graph-genome-workbench’s past year of commit activity
    Python 5 MIT 0 0 0 Updated Sep 16, 2024
  • HLA-LA Public

    Fast HLA type inference from whole-genome data

    DiltheyLab/HLA-LA’s past year of commit activity
    C++ 127 GPL-3.0 41 43 (8 issues need help) 1 Updated Aug 2, 2024
  • RSVTyper Public
    DiltheyLab/RSVTyper’s past year of commit activity
    Python 2 0 0 0 Updated Jun 6, 2024
  • VaCaHLA Public

    Snakemake pipeline to call somatic mutations in the HLA region

    DiltheyLab/VaCaHLA’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Apr 24, 2024
  • cfCOP Public
    DiltheyLab/cfCOP’s past year of commit activity
    0 MIT 0 0 0 Updated Nov 3, 2023
  • MetaMaps Public

    Long-read metagenomic analysis

    DiltheyLab/MetaMaps’s past year of commit activity
    Perl 99 23 25 (2 issues need help) 1 Updated Oct 10, 2023
  • MHC-annotation Public

    Tools to annotate haplotypes of MHC with gene and transcript information

    DiltheyLab/MHC-annotation’s past year of commit activity
    Python 5 MIT 0 4 0 Updated May 11, 2022
  • SARS-CoV2-Dashboard-Releases Public

    Releases of our Dashboard get pushed here automatically

    DiltheyLab/SARS-CoV2-Dashboard-Releases’s past year of commit activity
    2 MIT 0 0 0 Updated Feb 19, 2021
  • ContigAnalysisScripts Public

    several small python scripts to analyse long read and short read data for scaffolding MHC contigs

    DiltheyLab/ContigAnalysisScripts’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Nov 27, 2020
  • Teaching Public
    DiltheyLab/Teaching’s past year of commit activity
    0 0 0 0 Updated Jun 30, 2020
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