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I need samtools >=1.3 #86

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dennis-serum opened this issue Jan 19, 2023 · 2 comments
Open

I need samtools >=1.3 #86

dennis-serum opened this issue Jan 19, 2023 · 2 comments
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@dennis-serum
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I am attempting to run HLA-LA.pl and I get "I need samtools >=1.3" error. However, I have samtools 1.16.1 installed and it is in the correct identified path above this error.
@AlexanderDilthey
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Could you double-check that the 1.16.1 version of samtools is the one used by HLA*LA? (I.e., there is no other samtools specified in the file paths.ini)? Could you post the output of samtools --version?

@bsb2014
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bsb2014 commented Nov 13, 2023

See #57

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@AlexanderDilthey @bsb2014 @dennis-serum