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DingWB/czip

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Chunk ZIP

Installation

pip install ChunkZIP
#or
pip install git+http://github.com/DingWB/czip

Implementation

allcools ballcools czip
Format .tsv.gz .ballc .cz
Compression algorithm bgzip bgzip czip
Support Random Access ? Yes Yes Yes
Need extra index file for query? Yes yes No
Quickly Merge? No No Yes

img.png

Usage

Documentation

Example dataset

https://figshare.com/articles/dataset/czip_example_data/25374073