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Conda packages and image test-driven text removal for Miniconda on Ap…
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…pveyor for #744 and #690 (#823)

* Conda envs and packages for Miniconda on Appveyor

* Remove x/y labels and legends, update baselines

* Fix invalid escape sequence warning

* Use windows_tol for win_conda envs in jointplot, avoid pytest 4.6.0

* Allow mpl 3.0.0 in requirements, test requirements

* Remove unused imports

* Adjust tols, use is_winconda_env as import

* Maintain exclusion for mpl 3.0.0; broke images silently

* update images
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nickpowersys authored and ndanielsen committed Jun 7, 2019
1 parent ae15dec commit a39df0d
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35 changes: 22 additions & 13 deletions .appveyor.yml
Original file line number Diff line number Diff line change
@@ -1,7 +1,6 @@
# AppVeyor is a CI service to build and run tests under Windows
# https://ci.appveyor.com/project/districtdatalabs/yellowbrick

# Temporary work around see #744
image:
- Previous Visual Studio 2017

Expand Down Expand Up @@ -37,25 +36,35 @@ environment:
PYTHON_VERSION: "3.7"
PYTHON_ARCH: "64"

# Temporary work around see #744
# - PYTHON: "C:\\Miniconda3-x64"
# PYTHON_VERSION: "3.6"
# MINICONDA_VERSION: "4.5"
# PYTHON_ARCH: "64"
- PYTHON: "C:\\Miniconda36-x64"
PYTHON_VERSION: "3.6"
MINICONDA_VERSION: "4.5.4"
PYTHON_ARCH: "64"

- PYTHON: "C:\\Miniconda37-x64"
PYTHON_VERSION: "3.7"
MINICONDA_VERSION: "4.5.12"
PYTHON_ARCH: "64"


# Cancel pending jobs after first job failure
matrix:
fast_finish: true

install:
- "SET PATH=%MINICONDA3%;%MINICONDA3%\\Scripts;%PATH%"
- "SET PATH=%PYTHON%;%PYTHON%\\Scripts;%PATH%"
- "python -m pip install -U pip"
- "python -m pip install -U wheel"
- "python -m pip install -U -r requirements.txt"
- "python -m pip install -U -r tests/requirements.txt"
- "python -m nltk.downloader popular"
- "SET PATH=%PYTHON%;%PYTHON%\\Scripts;%PATH%"
- cmd: "IF '%MINICONDA_VERSION%'=='' (
python -m pip install -U pip &&
python -m pip install -U wheel &&
python -m pip install -U -r requirements.txt &&
python -m pip install -U -r tests/requirements.txt
) ELSE (
conda update -n base conda --yes &&
conda config --add channels conda-forge &&
conda env create -f tests/requirements.txt -n yellowbrick &&
call activate yellowbrick
)"
- "python -m nltk.downloader popular"

# No requirement to build any C libraries
build: off
Expand Down
26 changes: 22 additions & 4 deletions tests/base.py
Original file line number Diff line number Diff line change
Expand Up @@ -16,6 +16,7 @@

import os
import inspect
import sys

import unittest
import matplotlib as mpl
Expand All @@ -28,6 +29,11 @@
from yellowbrick.exceptions import ImageComparisonFailure


def is_winconda_env():
return (os.name == 'nt' and
os.path.exists(os.path.join(sys.prefix, 'conda-meta')))


##########################################################################
## Module Constants
##########################################################################
Expand Down Expand Up @@ -153,7 +159,7 @@ class ImageComparison(object):
than this value.
windows_tol : float, default: 0.01
The tolerace (tol) parameter for the windows operating system environment.
The tolerance (tol) parameter for the windows operating system environment.
ext : string, default: ".png"
The file extension to save the actual and baseline images as.
Expand All @@ -166,13 +172,20 @@ class ImageComparison(object):
remove_title : bool, default: True
Remove the title since different OS may have varying fonts.
remove_labels : bool, default: True
Remove the x and y labels since different OS may have varying fonts.
remove_legend : bool, default: True
Remove the legend since different OS may have varying fonts.
Raises
------
ValueError : at least one of visualizer or ax must be specified.
"""

def __init__(self, stack, visualizer=None, ax=None, tol=0.01, windows_tol=0.01, ext=".png",
remove_ticks=True, remove_title=True, remove_legend=False):
def __init__(self, stack, visualizer=None, ax=None, tol=0.01,
windows_tol=0.01, ext=".png", remove_ticks=True,
remove_title=True, remove_labels=True, remove_legend=True):

# Ensure we have something to draw on
if visualizer is None and ax is None:
Expand Down Expand Up @@ -212,6 +225,7 @@ def __init__(self, stack, visualizer=None, ax=None, tol=0.01, windows_tol=0.01,
self.ext = ext
self.remove_ticks = remove_ticks
self.remove_title = remove_title
self.remove_labels = remove_labels
self.remove_legend = remove_legend

def __call__(self):
Expand Down Expand Up @@ -279,7 +293,11 @@ def cleanup(self):
except AttributeError:
continue

if self.remove_legend:
if self.remove_labels:
self.ax.set_xlabel("")
self.ax.set_ylabel("")

if self.remove_legend and self.ax.get_legend() is not None:
self.ax.legend_.remove()

def save(self):
Expand Down
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4 changes: 2 additions & 2 deletions tests/requirements.txt
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@ numpy>=1.13.0
cycler>=0.10.0

# Testing Requirements
pytest>=4.2.0
pytest>=4.2.0, !=4.6.0
pytest-cov>=2.6.1
pytest-flakes>=4.0.0
#pytest-spec>=1.1.0
Expand All @@ -18,4 +18,4 @@ nltk>=3.2
# spacy>=2.0.18
pandas>=0.20
umap-learn==0.3
numba==0.42
numba==0.42
28 changes: 6 additions & 22 deletions tests/test_contrib/test_scatter.py
Original file line number Diff line number Diff line change
Expand Up @@ -16,18 +16,16 @@
# Imports
##########################################################################

from unittest import mock

import matplotlib as mpl
import pytest
import numpy as np
import matplotlib as mptl

from yellowbrick.style import palettes
from tests.base import VisualTestCase
from yellowbrick.contrib.scatter import *
from yellowbrick.datasets import load_occupancy
from yellowbrick.exceptions import YellowbrickValueError
from yellowbrick.exceptions import ImageComparisonFailure

from unittest import mock
from tests.base import VisualTestCase
from yellowbrick.style import palettes

try:
import pandas as pd
Expand Down Expand Up @@ -172,7 +170,7 @@ def test_scatter_quick_method(self):
ax = scatterviz(X[:, :2], y=y, ax=None, features=features)

# test that is returns a matplotlib obj with axes
self.assertIsInstance(ax, mptl.axes.Axes)
self.assertIsInstance(ax, mpl.axes.Axes)

@pytest.mark.skipif(pd is None, reason="pandas is required for this test")
def test_integrated_scatter_with_pandas(self):
Expand Down Expand Up @@ -230,17 +228,3 @@ def test_scatter_image(self):
visualizer.draw(X_two_cols, self.y)

self.assert_images_similar(visualizer)

def test_scatter_image_fail(self):
"""
Assert bad image similarity on scatterviz errors
"""

X_two_cols = self.X[:, :2]
features = ["temperature", "relative humidity"]
visualizer = ScatterViz(features=features)
visualizer.fit(X_two_cols, self.y)
visualizer.draw(X_two_cols, self.y)

with self.assertRaises(ImageComparisonFailure):
self.assert_images_similar(visualizer)
8 changes: 4 additions & 4 deletions tests/test_features/test_base.py
Original file line number Diff line number Diff line change
Expand Up @@ -17,18 +17,18 @@
## Imports
##########################################################################

import unittest
from yellowbrick.base import Visualizer
from yellowbrick.features.base import FeatureVisualizer
from tests.base import VisualTestCase

from yellowbrick.base import *
from yellowbrick.features.base import *
from sklearn.base import BaseEstimator, TransformerMixin


##########################################################################
## FeatureVisualizer Base Tests
##########################################################################

class FeatureVisualizerBaseTests(unittest.TestCase):
class FeatureVisualizerBaseTests(VisualTestCase):

def test_subclass(self):
"""
Expand Down
27 changes: 13 additions & 14 deletions tests/test_features/test_jointplot.py
Original file line number Diff line number Diff line change
Expand Up @@ -23,18 +23,18 @@
##########################################################################

import sys
import pytest
import numpy as np

from functools import partial
from tests.base import VisualTestCase
from ..fixtures import TestDataset
from unittest.mock import patch, MagicMock

from yellowbrick.features.jointplot import *
from yellowbrick.exceptions import YellowbrickValueError
import numpy as np
import pytest
from sklearn.datasets import make_classification, make_regression

from tests.base import is_winconda_env, VisualTestCase
from yellowbrick.exceptions import YellowbrickValueError
from yellowbrick.features.jointplot import *
from ..fixtures import TestDataset

try:
# Only available in Matplotlib >= 2.0.2
from mpl_toolkits.axes_grid1 import make_axes_locatable
Expand All @@ -46,6 +46,7 @@
except ImportError:
pd = None

win_tol = 5.5 if is_winconda_env() else None

##########################################################################
## Fixtures
Expand Down Expand Up @@ -183,7 +184,7 @@ def test_columns_none_x_y(self):

oz.finalize()
tol = 2.0 if sys.platform == "win32" else 0.01 # Fails on AppVeyor with RMS 1.859
self.assert_images_similar(oz, tol=tol)
self.assert_images_similar(oz, tol=tol, windows_tol=win_tol)

def test_columns_none_x(self):
"""
Expand Down Expand Up @@ -234,8 +235,7 @@ def test_columns_single_int_index_numpy(self):
assert hasattr(oz, "corr_")

oz.finalize()
tol = 0.5 if sys.platform == "win32" else 0.01 # Fails on AppVeyor with RMS 0.442
self.assert_images_similar(oz, tol=tol)
self.assert_images_similar(oz, windows_tol=win_tol)

@pytest.mark.skipif(pd is None, reason="test requires pandas")
def test_columns_single_str_index_pandas(self):
Expand All @@ -249,8 +249,7 @@ def test_columns_single_str_index_pandas(self):
assert hasattr(oz, "corr_")

oz.finalize()
tol = 0.5 if sys.platform == "win32" else 0.01 # Fails on AppVeyor with RMS 0.447
self.assert_images_similar(oz, tol=tol)
self.assert_images_similar(oz, windows_tol=win_tol)

def test_columns_double_int_index_numpy_no_y(self):
"""
Expand Down Expand Up @@ -376,7 +375,7 @@ def test_columns_single_int_index_numpy_hist(self):

oz.finalize()
tol = 0.5 if sys.platform == "win32" else 0.01 # Fails on AppVeyor with RMS 0.470
self.assert_images_similar(oz, tol=tol)
self.assert_images_similar(oz, tol=tol, windows_tol=win_tol)

@pytest.mark.skipif(pd is None, reason="test requires pandas")
def test_columns_single_str_index_pandas_hist(self):
Expand All @@ -391,7 +390,7 @@ def test_columns_single_str_index_pandas_hist(self):

oz.finalize()
tol = 0.5 if sys.platform == "win32" else 0.01 # Fails on AppVeyor with RMS 0.470
self.assert_images_similar(oz, tol=tol)
self.assert_images_similar(oz, tol=tol, windows_tol=win_tol)

def test_columns_double_int_index_numpy_no_y_hist(self):
"""
Expand Down
1 change: 1 addition & 0 deletions tests/test_meta.py
Original file line number Diff line number Diff line change
Expand Up @@ -145,6 +145,7 @@ def test_random_visualizer_not_close(self):
"""
Test that not close visualizers raise an assertion error.
"""
# Baseline image random_state=225
viz = RandomVisualizer(random_state=224).fit()
viz.poof()

Expand Down
2 changes: 0 additions & 2 deletions tests/test_target/test_class_balance.py
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,6 @@
##########################################################################

import pytest
import numpy as np

from yellowbrick.target.class_balance import *
from yellowbrick.exceptions import YellowbrickValueError
Expand Down Expand Up @@ -178,7 +177,6 @@ def test_pandas_occupancy_balance(self):
self.assert_images_similar(oz)

@pytest.mark.skipif(pd is None, reason="test requires pandas")
@pytest.mark.xfail(reason="failing across platforms, appears to be aliasing")
def test_pandas_occupancy_compare(self):
"""
Test pandas data frame with string target in compare mode
Expand Down
3 changes: 2 additions & 1 deletion tests/test_text/test_dispersion.py
Original file line number Diff line number Diff line change
Expand Up @@ -105,7 +105,8 @@ def test_dispersion_plot_annotate_docs(self):
visualizer.fit(text)
visualizer.ax.grid(False)

self.assert_images_similar(visualizer, tol=25)
self.assert_images_similar(visualizer, tol=25.5)


def test_dispersion_plot_color_by_class(self):
"""
Expand Down

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