Merge #2036 (DougBurke) - Update sherpa citations #988
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| name: Pip CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: | |
| - '*' | |
| pull_request: | |
| jobs: | |
| tests: | |
| defaults: | |
| run: | |
| shell: bash | |
| name: ${{ matrix.name }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| include: | |
| - name: Linux Minimum Setup | |
| os: ubuntu-latest | |
| python-version: "3.9" | |
| numpy-pkg: 'numpy>=1.21,<1.22' | |
| install-type: develop | |
| test-data: none | |
| - name: Linux Build (w/o Xspec; Python 3.11) | |
| os: ubuntu-latest | |
| python-version: "3.11" | |
| numpy-pkg: 'numpy' | |
| install-type: install | |
| test-data: package | |
| fits-pkg: 'astropy' | |
| matplotlib-pkg: 'matplotlib>=3,<4' | |
| bokeh-pkg: 'bokeh>=3,<4' | |
| - name: Linux Build (w/o Astropy or Xspec) | |
| os: ubuntu-latest | |
| python-version: "3.9" | |
| numpy-pkg: 'numpy' | |
| install-type: install | |
| test-data: package | |
| matplotlib-pkg: 'matplotlib>=3,<4' | |
| bokeh-pkg: 'bokeh>=3,<4' | |
| - name: Linux Build (w/o Matplotlib, Xspec, or test data) | |
| os: ubuntu-latest | |
| python-version: "3.10" | |
| numpy-pkg: 'numpy' | |
| install-type: develop | |
| fits-pkg: 'astropy' | |
| test-data: none | |
| - name: Linux Build (submodule data w/o Matplotlib or Xspec) | |
| os: ubuntu-latest | |
| python-version: "3.9" | |
| numpy-pkg: 'numpy' | |
| install-type: develop | |
| fits-pkg: 'astropy' | |
| test-data: submodule | |
| steps: | |
| - name: Checkout Code | |
| uses: actions/checkout@v4.1.1 | |
| with: | |
| submodules: 'True' | |
| - name: Pip Testing Setup - Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Pip Testing Setup - Dependencies | |
| env: | |
| NUMPYVER: ${{ matrix.numpy-pkg }} | |
| FITSBUILD: ${{ matrix.fits-pkg }} | |
| MATPLOTLIBVER: ${{ matrix.matplotlib-pkg }} | |
| BOKEHVER: ${{ matrix.BOKEH-pkg }} | |
| run: | | |
| # In case we forget to set matrix.numpy-pkg | |
| if [ ! -n "${NUMPYVER}" ] ; then | |
| NUMPYVER='numpy' | |
| fi | |
| pip install ${NUMPYVER} ${FITSBUILD} ${MATPLOTLIBVER} ${BOKEHVER} | |
| # Ensure we use an old-enough setuptools: see issue #1456 | |
| pip install 'setuptools < 60' | |
| - name: Build Sherpa (install) | |
| if: matrix.install-type == 'install' | |
| run: | | |
| pip install . --verbose | |
| - name: Build Sherpa (develop) | |
| if: matrix.install-type == 'develop' | |
| run: | | |
| pip install -e . --verbose | |
| - name: install pytest-xvfb | |
| if: matrix.test-data == 'package' | |
| run: | | |
| pip install pytest-xvfb | |
| - name: sherpa_test with test-data=${{ matrix.test-data }} | |
| if: matrix.test-data == 'package' || matrix.test-data == 'none' | |
| env: | |
| TEST: ${{ matrix.test-data }} | |
| run: | | |
| git submodule deinit -f . | |
| pip install pytest-cov | |
| cd $HOME | |
| sherpa_test --cov=sherpa --cov-report=xml:${{ github.workspace }}/coverage.xml | |
| - name: Submodule test with pytest | |
| if: matrix.test-data == 'submodule' | |
| run: | | |
| pip install -r test_requirements.txt | |
| pip install pytest-cov | |
| cd $HOME | |
| pytest --cov=sherpa --cov-report=xml:${{ github.workspace }}/coverage.xml | |
| - name: upload coverage | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| files: ${{ github.workspace }}/coverage.xml | |
| verbose: true | |
| - name: Smoke Test | |
| env: | |
| FITS: ${{ matrix.fits-pkg }} | |
| run: | | |
| smokevars="-v 3" | |
| if [ ${FITS} != '' ] ; then | |
| smokevars="-f ${FITS} ${smokevars}" | |
| fi | |
| echo "** smoke test: ${smokevars}" | |
| cd ${HOME} | |
| sherpa_smoke ${smokevars} |